Looks like SMKREPORT program is crashing (please see the terminal output below). Yes, I have stacksize unlimited setting on.
[Iqbal@ADEQPlanning point]$ ./trial_Annual_ptegu_wintershld_onetime_12US1_2032fj_16j.csh
testing SRGPRO_PATH set by SRGPRO input: /home/Michael/RAID1/SMOKE/2016v2/ge_dat/gridding/surrogates/CONUS12_2017NEI_04mar2021/
Linux2_x86_64ifort
/home/Iqbal/Documents/SMOKE481/subsys/ioapi/Linux2_x86_64gfort/juldate: Permission denied.
/home/Iqbal/Documents/SMOKE481/subsys/ioapi/Linux2_x86_64gfort/juldate: Permission denied.
NOTE: Default MONTH setting to ‘jan’
cut: /home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/scripts/sectorlist_2032fj: No such file or directory
/bin/ls: No match.
/bin/ls: No match.
/bin/ls: No match.
/bin/ls: No match.
Creating dataset /home/Michael/RAID1/SMOKE/output2016v2/ge_dat/speciation/2032fj_16j/gspro_ptegu_wintershld_cmaq_cb6ae7_2032fj_16j_16j.txt
using script combine_data.csh
grep: 15923: No such file or directory
Processing environment variables GSPROTMP_A
Including file: /home/Michael/RAID1/SMOKE/2016v2/ge_dat/speciation/gspro_ptegu_wintershld_cmaq_cb6ae7_2032fj_16j_01may2019.txt
Creating dataset /home/Michael/RAID1/SMOKE/output2016v2/ge_dat/speciation/2032fj_16j/gsref_ptegu_wintershld_cmaq_cb6ae7_2032fj_16j_16j.txt
using script combine_data.csh
grep: 16068: No such file or directory
Processing environment variables GSREFTMP_A
Including file: /home/Michael/RAID1/SMOKE/2016v2/ge_dat/speciation/gsref_ptegu_wintershld_cmaq_cb6ae7_2032fj_16j_nf.txt
SCRIPT NOTE: Scanning GSREF for duplicate records
SCRIPT NOTE: No duplicates found in /home/Michael/RAID1/SMOKE/output2016v2/ge_dat/speciation/2032fj_16j/gsref_ptegu_wintershld_cmaq_cb6ae7_2032fj_16j_16j.txt
testing SRGPRO_PATH set by SRGPRO input: /home/Michael/RAID1/SMOKE/2016v2/ge_dat/gridding/surrogates/CONUS12_2017NEI_04mar2021/
Linux2_x86_64ifort
/home/Iqbal/Documents/SMOKE481/subsys/ioapi/Linux2_x86_64gfort/juldate: Permission denied.
/home/Iqbal/Documents/SMOKE481/subsys/ioapi/Linux2_x86_64gfort/juldate: Permission denied.
cut: /home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/scripts/sectorlist_2032fj: No such file or directory
Creating dataset /home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/inputs/ptegu_wintershld/ptinv_ptegu_wintershld_2032fj_16j.lst
using script combine_data.csh
Processing environment variables EMISINV_A EMISINV_B
Running part 1…
SCRIPT NOTE: Automatically deleting log file.
/home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/intermed/ptegu_wintershld/logs/smkinven_ptegu_wintershld_2032fj_16j.log
This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3
I/O Applications Programming Interface, [I/O API] which is
built on top of the netCDF I/O library (Copyright 1993, 1996
University Corporation for Atmospheric Research/Unidata
Program) and the PVM parallel-programming library (from
Oak Ridge National Laboratory).
Copyright (C) 1992-2002 MCNC,
(C) 1992-2018 Carlie J. Coats, Jr.,
(C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and
(C) 2014-2020 UNC Institute for the Environment.
Released under the GNU LGPL License, version 2.1. See URL
https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html
for conditions of use.
ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $
netCDF version 4.7.4 of Apr 7 2021 16:50:09 $
SMOKE ---------------
Copyright (c)2004 Environmental Modeling for Policy Development
All rights reserved
Program SMKINVEN, Version SMOKEv4.8.1_Jan2021
Online documentation
http://www.cep.unc.edu/empd/products/smoke
Program SMKINVEN to take ASCII area or point source files
in IDA, EMS-95, or SMOKE list format, or mobile files
in IDA format, and produce the I/O API and ASCII SMOKE
inventory files and list of unique SCCs in the inventory.
You will need to enter the logical names for the input and
output files (and to have set them prior to program start,
using "setenv <logicalname> <pathname>").
You may use END_OF-FILE (control-D) to quit the program
during logical-name entry. Default responses are given in
brackets [LIKE THIS] and can be accepted by hitting the
<RETURN> key.
3.420u 0.083s 0:03.51 99.7% 0+0k 0+13760io 0pf+0w
SCRIPT NOTE: timetracker is replacing line 2 of the TIMELOG file
now checking log file /home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/intermed/ptegu_wintershld/logs/smkinven_ptegu_wintershld_2032fj_16j.log
SCRIPT NOTE: Automatically deleting log file.
/home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/intermed/ptegu_wintershld/logs/spcmat_ptegu_wintershld_2032fj_16j_cmaq_cb6ae7.log
This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3
I/O Applications Programming Interface, [I/O API] which is
built on top of the netCDF I/O library (Copyright 1993, 1996
University Corporation for Atmospheric Research/Unidata
Program) and the PVM parallel-programming library (from
Oak Ridge National Laboratory).
Copyright (C) 1992-2002 MCNC,
(C) 1992-2018 Carlie J. Coats, Jr.,
(C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and
(C) 2014-2020 UNC Institute for the Environment.
Released under the GNU LGPL License, version 2.1. See URL
https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html
for conditions of use.
ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $
netCDF version 4.7.4 of Apr 7 2021 16:50:09 $
SMOKE ---------------
Copyright (c)2004 Environmental Modeling for Policy Development
All rights reserved
Program SPCMAT, Version SMOKEv4.8.1_Jan2021
Online documentation
http://www.cep.unc.edu/empd/products/smoke
Program SPCMAT to take a SMOKE area, mobile, or point source
inventory file, a speciation profiles file, a speciation
cross-reference file, an optional pollutant-to-pollutant,
conversion file, and produce mass-based and/or mole-based
SMOKE speciation matrices for all inventory pollutants
using run-time defined combinations of pollutants and model
species. The output species are defined at run time by the
speciation profiles file, permitting support of any chemical
mechanism.
You will need to enter the logical names for the input and
output files (and to have set them prior to program start,
using "setenv <logicalname> <pathname>").
You may use END_OF-FILE (control-D) to quit the program
during logical-name entry. Default responses are given in
brackets [LIKE THIS] and can be accepted by hitting the
<RETURN> key.
3.090u 0.058s 0:03.15 99.6% 0+0k 0+23904io 0pf+0w
SCRIPT NOTE: timetracker is replacing line 2 of the TIMELOG file
now checking log file /home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/intermed/ptegu_wintershld/logs/spcmat_ptegu_wintershld_2032fj_16j_cmaq_cb6ae7.log
SCRIPT NOTE: Automatically deleting log file.
/home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/intermed/ptegu_wintershld/logs/grdmat_ptegu_wintershld_2032fj_16j_12US2.log
This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3
I/O Applications Programming Interface, [I/O API] which is
built on top of the netCDF I/O library (Copyright 1993, 1996
University Corporation for Atmospheric Research/Unidata
Program) and the PVM parallel-programming library (from
Oak Ridge National Laboratory).
Copyright (C) 1992-2002 MCNC,
(C) 1992-2018 Carlie J. Coats, Jr.,
(C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and
(C) 2014-2020 UNC Institute for the Environment.
Released under the GNU LGPL License, version 2.1. See URL
https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html
for conditions of use.
ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $
netCDF version 4.7.4 of Apr 7 2021 16:50:09 $
SMOKE ---------------
Copyright (c)2004 Environmental Modeling for Policy Development
All rights reserved
Program GRDMAT, Version SMOKEv4.8.1_Jan2021
Online documentation
http://www.cep.unc.edu/empd/products/smoke
Program GRDMAT to take a SMOKE area, mobile, or point source
inventory file, gridding surrogates, surrogate cross-
reference, and an optional link definitions file, and produce
a SMOKE gridding matrix for a grid defined at run time. For
mobile sources, an "ungridding" matrix is also created to
allow the use of gridded temperature data in assigning
factors to mobile sources.
You will need to enter the logical names for the input and
output files (and to have set them prior to program start,
using "setenv <logicalname> <pathname>").
You may use END_OF-FILE (control-D) to quit the program
during logical-name entry. Default responses are given in
brackets [LIKE THIS] and can be accepted by hitting the
<RETURN> key.
0.612u 0.015s 0:00.30 206.6% 0+0k 0+880io 0pf+0w
SCRIPT NOTE: timetracker is replacing line 2 of the TIMELOG file
now checking log file /home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/intermed/ptegu_wintershld/logs/grdmat_ptegu_wintershld_2032fj_16j_12US2.log
SCRIPT NOTE: Automatically deleting log file.
/home/Michael/RAID1/SMOKE/output2016v2/2032fj_16j/intermed/ptegu_wintershld/logs/smkreport_ptegu_wintershld_2032fj_16j_inv.log
This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3
I/O Applications Programming Interface, [I/O API] which is
built on top of the netCDF I/O library (Copyright 1993, 1996
University Corporation for Atmospheric Research/Unidata
Program) and the PVM parallel-programming library (from
Oak Ridge National Laboratory).
Copyright (C) 1992-2002 MCNC,
(C) 1992-2018 Carlie J. Coats, Jr.,
(C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and
(C) 2014-2020 UNC Institute for the Environment.
Released under the GNU LGPL License, version 2.1. See URL
https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html
for conditions of use.
ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $
netCDF version 4.7.4 of Apr 7 2021 16:50:09 $
SMOKE ---------------
Copyright (c)2004 Environmental Modeling for Policy Development
All rights reserved
Program SMKREPORT, Version SMOKEv4.8.1_Jan2021
Online documentation
http://www.cep.unc.edu/empd/products/smoke
Program SMKREPORT to take any combination of SMOKE intermed-
iate files (but at least an inventory file) and generate
one or more user-defined reports in any combination of output
files.
You will need to enter the logical names for the input and
output files (and to have set them prior to program start,
using "setenv <logicalname> <pathname>").
You may use END_OF-FILE (control-D) to quit the program
during logical-name entry. Default responses are given in
brackets [LIKE THIS] and can be accepted by hitting the
<RETURN> key.
Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
Backtrace for this error:
Note: During my SMOKE4.8.1 installation , I couldn’t find SMKROOT/doc directory. Please see the 4th comment of this thread SMOKE v4.81 installtion issue: make: *** [rdemspd.o] Error 1