Start Model Run At Fri Jan 29 14:41:08 CST 2021 Compiler is set to gcc Working Directory is /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts Build Directory is /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/BLD_CCTM_v532_ISAM_gcc Output Directory is /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/output/2020-12-10/d03 Log Directory is /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/LOGS/2020-12-10/d03 Executable Name is CCTM_v532_ISAM.exe ---CMAQ EXECUTION ID: CMAQ_CCTMv532_ISAM_caoyq_20210129_064108_133898043 --- Set up input and output files for Day 2020-12-10. Existing Logs and Output Files for Day 2020-12-10 Will Be Deleted /bin/rm: No match. CMAQ Processing of Day 20201210 Began at Fri Jan 29 14:41:08 CST 2021 -------------------------------------------------------------------------- [[24869,1],0]: A high-performance Open MPI point-to-point messaging module was unable to find any relevant network interfaces: Module: OpenFabrics (openib) Host: node1 Another transport will be used instead, although this may result in lower performance. NOTE: You can disable this warning by setting the MCA parameter btl_base_warn_component_unused to 0. -------------------------------------------------------------------------- CTM_APPL | v532_ISAM_gcc_d03_20201210 ================================================================================ | | | The Community Multiscale Air Quality (CMAQ) Model | | Version 5.3.2 | | | | Built and Maintained by the | | Office of Research and Development | | United States Environmental Protection Agency | | | | https://www.epa.gov/cmaq | | | | Source Code: https://www.github.com/USEPA/cmaq/tree/master | | Documentation: https://www.github.com/USEPA/cmaq/tree/master/DOCS | | | | The CMAQ Model is tested and released with cooperation from | | the Community Modeling and Analysis System (CMAS) Center via | | contract support. CMAS is managed by the Institute for the | | Environment, University of North Carolina at Chapel Hill. | | CMAS URL: (https://www.cmascenter.org) | | | ================================================================================ This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.7.0 of Jan 21 2021 10:26:46 $ =========================================== |>--- ENVIRONMENT VARIABLE REPORT ---<| =========================================== |> Grid and High-Level Model Parameters: +========================================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- BLD | (default) OUTDIR | /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/output/2020-12-10/d03 NEW_START | T ISAM_NEW_START | Y GRID_NAME | d03 CTM_TSTEP | 10000 CTM_RUNLEN | 230000 CTM_PROGNAME | DRIVER (default) CTM_STDATE | 2020345 CTM_STTIME | 10000 NPCOL_NPROW | 2 2 CTM_MAXSYNC | 300 CTM_MINSYNC | 60 |> Multiprocess control, output and error checking: +==================================================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- PRINT_PROC_TIME | T FL_ERR_STOP | F CTM_CKSUM | T AVG_FILE_ENDTIME | F AVG_CONC_SPCS | ALL CONC_SPCS | NH3 ACONC_BLEV_ELEV | 1 1 CONC_BLEV_ELEV | 1 1 AISAM_BLEV_ELEV | 1 1 ISAM_BLEV_ELEV | 1 1 IOAPI_LOG_WRITE | F VERTEXT | F VERTEXT_COORD_PA | /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/lonlat.csv gc_matrix_nml | /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/BLD_CCTM_v532_ISAM_gcc/GC_cb6r3_ae7_aq.nml ae_matrix_nml | /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/BLD_CCTM_v532_ISAM_gcc/AE_cb6r3_ae7_aq.nml nr_matrix_nml | /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/BLD_CCTM_v532_ISAM_gcc/NR_cb6r3_ae7_aq.nml tr_matrix_nml | /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/BLD_CCTM_v532_ISAM_gcc/Species_Table_TR_0.nml |> Chemistry and Photolysis: +============================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_PHOTDIAG | F CORE_SHELL_OPTIC | F (default) OPTICS_MIE_CALC | F (default) GEAR_ATOL | 0.100E-08 (default) GEAR_RTOL | 0.100E-02 (default) RB_RTOL | 0.100E-02 (default) RB_ATOL | 0.100E-06 (default) |> Aerosols: +============= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_AVISDIAG | F (default) CTM_ZERO_PCSOA | F (default) CTM_AOD | F (default) CTM_PMDIAG | F CTM_APMDIAG | T APMDIAG_BLEV_ELE | 1 1 AVG_PMDIAG_SPCS | (default) STM_SO4TRACK | F |> Cloud Processes: +==================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CLD_DIAG | F |> Air-Surface Exchange Processes: +=================================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- PX_VERSION | T CTM_ABFLUX | F CTM_MOSAIC | F CTM_SFC_HONO | T CLM_VERSION | T NOAH_VERSION | T CTM_STAGE | F (default) CTM_DEPV_FILE | F CTM_HGBIDI | F CTM_BIDI_FERT_NH | T CTM_WBDUST_BELD | UNKNOWN |> Transport Processes: +======================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_VDIFF_DIAG_F | F (default) SIGMA_SYNC_TOP | 0.700E+00 ADV_HDIV_LIM | 0.900E+00 (default) CTM_ADV_CFL | 0.950E+00 KZMIN | T CTM_WVEL | T CTM_GRAV_SETL | T |> Emissions Parameters: +========================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- EMISSCTRL_NML | /home/caoyq/CMAQ-5.3.2_ISAM/CCTM/scripts/BLD_CCTM_v532_ISAM_gcc/EmissCtrl_cb6r3_ae7_aq.nml CTM_EMLAYS | 0 (default) N_EMIS_GR | 6 N_EMIS_TR | 0 (default) CTM_EMISCHK | F CTM_BIOGEMIS | F BIOG_SPRO | DEFAULT (default) BIOSW_YN | F (default) SUMMER_YN | T (default) B3GTS_DIAG | F CTM_MGEMDIAG | F (default) CTM_OCEAN_CHEM | F CTM_WB_DUST | F CTM_DUSTEM_DIAG | F CTM_SSEMDIAG | F CTM_LTNG_NO | F LTNG_ASSIM_DT | 0 (default) LTNGNO | InLine (default) USE_NLDN | F (default) LTNGDIAG | F MOLSNCG | 0.350E+03 (default) MOLSNIC | 0.350E+03 (default) N_EMIS_PT | 0 IPVERT | 0 (default) EMISDIAG | F EMIS_SYM_DATE | F (default) |> Process Analysis Parameters: +================================ --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_PROCAN | F PA_BCOL_ECOL | (default) PA_BROW_EROW | (default) PA_BLEV_ELEV | (default) MET_TSTEP | 10000 (default) MET data determined based on WRF ARW version 4.2 -=- MPP Processor-to-Subdomain Map -=- Number of Processors = 4 ____________________________________________________ | | | PE #Cols Col_Range #Rows Row_Range | |__________________________________________________| | | | 0 107 1: 107 103 1: 103 | | 1 107 108: 214 103 1: 103 | | 2 107 1: 107 102 104: 205 | | 3 107 108: 214 102 104: 205 | |__________________________________________________| -------------------------------------------------------------------------- MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD with errorcode 32767. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. -------------------------------------------------------------------------- [node1:10829] 3 more processes have sent help message help-mpi-btl-base.txt / btl:no-nics [node1:10829] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages real 1.44 user 0.04 sys 0.09 ************************************************************** ** Runscript Detected an Error: CGRID file was not written. ** ** This indicates that CMAQ was interrupted or an issue ** ** exists with writing output. The runscript will now ** ** abort rather than proceeding to subsequent days. ** ************************************************************** ================================== ***** CMAQ TIMING REPORT ***** ================================== Start Day: 2020-12-10 End Day: 2020-12-13 Number of Simulation Days: 1 Domain Name: d03 Number of Grid Cells: 1491580 (ROW x COL x LAY) Number of Layers: 34 Number of Processes: 4 All times are in seconds. Num Day Wall Time 01 2020-12-10 1.44 Total Time = 1.44 Avg. Time = 1.44