Start Model Run At Tue Feb 14 16:36:05 CST 2023 Working Directory is /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/CCTM/scripts Build Directory is /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/CCTM/scripts/BLD_CCTM_v531_bisheng Output Directory is /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM Log Directory is /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/LOGS Executable Name is CCTM_v531.exe ---CMAQ EXECUTION ID: CMAQ_CCTMv531_dengt_20230214_083605_866028450 --- Set up input and output files for Day 2015-05-26. Existing Logs and Output Files for Day 2015-05-26 Will Be Deleted /bin/rm: No match. CMAQ Processing of Day 20150526 Began at Tue Feb 14 16:36:06 CST 2023 CTM_APPL | v531_bisheng_M_9_2015_20150526 ================================================================================ | | | The Community Multiscale Air Quality (CMAQ) Model | | Version 5.3.1 | | | | Built and Maintained by the | | Office of Research and Development | | United States Environmental Protection Agency | | | | https://www.epa.gov/cmaq | | | | Source Code: https://www.github.com/USEPA/cmaq/tree/master | | Documentation: https://www.github.com/USEPA/cmaq/tree/master/DOCS | | | | The CMAQ Model is tested and released with cooperation from | | the Community Modeling and Analysis System (CMAS) Center via | | contract support. CMAS is managed by the Institute for the | | Environment, University of North Carolina at Chapel Hill. | | CMAS URL: (https://www.cmascenter.org) | | | ================================================================================ This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 150 2020-04-11 17:51:44Z coats $ netCDF version 4.8.1 of Jun 28 2022 15:24:58 $ =========================================== |>--- ENVIRONMENT VARIABLE REPORT ---<| =========================================== |> Grid and High-Level Model Parameters: +========================================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- BLD | (default) OUTDIR | /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM NEW_START | T ISAM_NEW_START | Y (default) GRID_NAME | M_9_2015 CTM_TSTEP | 10000 CTM_RUNLEN | 3340000 CTM_PROGNAME | DRIVER (default) CTM_STDATE | 2015146 CTM_STTIME | 80000 NPCOL_NPROW | 8 4 CTM_MAXSYNC | 300 CTM_MINSYNC | 60 |> Multiprocess control, output and error checking: +==================================================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- PRINT_PROC_TIME | T FL_ERR_STOP | F CTM_CKSUM | T AVG_FILE_ENDTIME | F AVG_CONC_SPCS | O3 NO CO NO2 ASO4I ASO4J NH3 CONC_SPCS | (default) ACONC_BLEV_ELEV | 1 1 CONC_BLEV_ELEV | (default) IOAPI_LOG_WRITE | F VERTEXT | F (default) VERTEXT_COORD_PA | (default) gc_matrix_nml | /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/CCTM/scripts/BLD_CCTM_v531_bisheng/GC_cb6r3_ae7_aq.nml ae_matrix_nml | /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/CCTM/scripts/BLD_CCTM_v531_bisheng/AE_cb6r3_ae7_aq.nml nr_matrix_nml | /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/CCTM/scripts/BLD_CCTM_v531_bisheng/NR_cb6r3_ae7_aq.nml tr_matrix_nml | /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/CCTM/scripts/BLD_CCTM_v531_bisheng/Species_Table_TR_0.nml |> Chemistry and Photolysis: +============================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_PHOTDIAG | F CORE_SHELL_OPTIC | F (default) OPTICS_MIE_CALC | F (default) GEAR_ATOL | 0.100E-08 (default) GEAR_RTOL | 0.100E-02 (default) RB_RTOL | 0.100E-02 (default) RB_ATOL | 0.100E-06 (default) |> Aerosols: +============= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_AVISDIAG | F (default) CTM_ZERO_PCSOA | F (default) CTM_AOD | F (default) CTM_PMDIAG | F CTM_APMDIAG | T APMDIAG_BLEV_ELE | 1 1 AVG_PMDIAG_SPCS | (default) STM_SO4TRACK | F |> Cloud Processes: +==================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CLD_DIAG | F |> Air-Surface Exchange Processes: +=================================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- PX_VERSION | T CTM_ABFLUX | F CTM_MOSAIC | F CTM_SFC_HONO | T CLM_VERSION | F NOAH_VERSION | F CTM_STAGE | F (default) CTM_DEPV_FILE | F CTM_HGBIDI | F CTM_BIDI_FERT_NH | T CTM_WBDUST_BELD | BELD3 |> Transport Processes: +======================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_VDIFF_DIAG_F | F (default) SIGMA_SYNC_TOP | 0.700E+00 ADV_HDIV_LIM | 0.900E+00 (default) CTM_ADV_CFL | 0.950E+00 KZMIN | T CTM_WVEL | F CTM_GRAV_SETL | T |> Emissions Parameters: +========================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- EMISSCTRL_NML | /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/CCTM/scripts/BLD_CCTM_v531_bisheng/EmissCtrl_cb6r3_ae7_aq.nml CTM_EMLAYS | 0 (default) N_EMIS_GR | 2 N_EMIS_TR | 0 (default) CTM_EMISCHK | F CTM_BIOGEMIS | F BIOG_SPRO | DEFAULT (default) BIOSW_YN | F (default) SUMMER_YN | T (default) B3GTS_DIAG | F CTM_MGEMDIAG | F (default) CTM_OCEAN_CHEM | F CTM_WB_DUST | F CTM_DUSTEM_DIAG | F CTM_SSEMDIAG | F CTM_LTNG_NO | F LTNG_ASSIM_DT | 0 (default) LTNGNO | InLine (default) USE_NLDN | F (default) LTNGDIAG | F MOLSNCG | 0.350E+03 (default) MOLSNIC | 0.350E+03 (default) N_EMIS_PT | 0 (default) IPVERT | 0 (default) EMISDIAG | F EMIS_SYM_DATE | F |> Process Analysis Parameters: +================================ --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_PROCAN | T PA_BCOL_ECOL | 1 98 PA_BROW_EROW | 1 74 PA_BLEV_ELEV | 1 25 MET data determined based on WRF ARM version 4.0 -=- MPP Processor-to-Subdomain Map -=- Number of Processors = 32 ____________________________________________________ | | | PE #Cols Col_Range #Rows Row_Range | |__________________________________________________| | | | 0 13 1: 13 19 1: 19 | | 1 13 14: 26 19 1: 19 | | 2 12 27: 38 19 1: 19 | | 3 12 39: 50 19 1: 19 | | 4 12 51: 62 19 1: 19 | | 5 12 63: 74 19 1: 19 | | 6 12 75: 86 19 1: 19 | | 7 12 87: 98 19 1: 19 | | 8 13 1: 13 19 20: 38 | | 9 13 14: 26 19 20: 38 | | 10 12 27: 38 19 20: 38 | | 11 12 39: 50 19 20: 38 | | 12 12 51: 62 19 20: 38 | | 13 12 63: 74 19 20: 38 | | 14 12 75: 86 19 20: 38 | | 15 12 87: 98 19 20: 38 | | 16 13 1: 13 18 39: 56 | | 17 13 14: 26 18 39: 56 | | 18 12 27: 38 18 39: 56 | | 19 12 39: 50 18 39: 56 | | 20 12 51: 62 18 39: 56 | | 21 12 63: 74 18 39: 56 | | 22 12 75: 86 18 39: 56 | | 23 12 87: 98 18 39: 56 | | 24 13 1: 13 18 57: 74 | | 25 13 14: 26 18 57: 74 | | 26 12 27: 38 18 57: 74 | | 27 12 39: 50 18 57: 74 | | 28 12 51: 62 18 57: 74 | | 29 12 63: 74 18 57: 74 | | 30 12 75: 86 18 57: 74 | | 31 12 87: 98 18 57: 74 | |__________________________________________________| ================================ |>--- TIME INTEGRATION ---<| ================================ Processing Day/Time [YYYYDDD:HHMMSS]: 2015146:080000 Which is Equivalent to (UTC): 8:00:00 Tuesday, May 26, 2015 Time-Step Length (HHMMSS): 000500 ERROR: Surrogate Species GDAY on emission stream 2 has units DAY which are unkown to CMAQ. Please correct them to proceed. Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP Warning: ieee_underflow is signaling Warning: ieee_inexact is signaling FORTRAN STOP -------------------------------------------------------------------------- mpirun has exited due to process rank 0 with PID 0 on node grmchwf2cli1 exiting improperly. There are three reasons this could occur: 1. this process did not call "init" before exiting, but others in the job did. This can cause a job to hang indefinitely while it waits for all processes to call "init". By rule, if one process calls "init", then ALL processes must call "init" prior to termination. 2. this process called "init", but exited without calling "finalize". By rule, all processes that call "init" MUST call "finalize" prior to exiting or it will be considered an "abnormal termination" 3. this process called "MPI_Abort" or "orte_abort" and the mca parameter orte_create_session_dirs is set to false. In this case, the run-time cannot detect that the abort call was an abnormal termination. Hence, the only error message you will receive is this one. This may have caused other processes in the application to be terminated by signals sent by mpirun (as reported here). You can avoid this message by specifying -quiet on the mpirun command line. -------------------------------------------------------------------------- real 11.95 user 57.48 sys 124.80 ************************************************************** ** Runscript Detected an Error: CGRID file was not written. ** ** This indicates that CMAQ was interrupted or an issue ** ** exists with writing output. The runscript will now ** ** abort rather than proceeding to subsequent days. ** ************************************************************** ================================== ***** CMAQ TIMING REPORT ***** ================================== Start Day: 2015-05-26 End Day: 2015-06-09 Number of Simulation Days: 1 Domain Name: M_9_2015 Number of Grid Cells: 253820 (ROW x COL x LAY) Number of Layers: 35 Number of Processes: 32 All times are in seconds. Num Day Wall Time 01 2015-05-26 11.95 Total Time = 11.95 Avg. Time = 11.95