================================================================================ | | | The Community Multiscale Air Quality (CMAQ) Model | | Version 5.3.1 | | | | Built and Maintained by the | | Office of Research and Development | | United States Environmental Protection Agency | | | | https://www.epa.gov/cmaq | | | | Source Code: https://www.github.com/USEPA/cmaq/tree/master | | Documentation: https://www.github.com/USEPA/cmaq/tree/master/DOCS | | | | The CMAQ Model is tested and released with cooperation from | | the Community Modeling and Analysis System (CMAS) Center via | | contract support. CMAS is managed by the Institute for the | | Environment, University of North Carolina at Chapel Hill. | | CMAS URL: (https://www.cmascenter.org) | | | ================================================================================ This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 150 2020-04-11 17:51:44Z coats $ Version with PARMS3.EXT/PARAMETER::MXVARS3= 2048 netCDF version 4.8.1 of Jun 28 2022 15:24:58 $ EXECUTION_ID: CMAQ_CCTMv531_dengt_20230214_083327_903791298 Value for IOAPI_CHECK_HEADERS: N returning FALSE "MET_CRO_3D" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/METCRO3D_20150526.nc" File type GRDDED3 Execution ID "mcip" Grid name "M_9_2015_CROSS" Dimensions: 74 rows, 98 cols, 38 lays, 16 vbles NetCDF ID: 65536 opened as READONLY Starting date and time 2015146:060000 (6:00:00 May 26, 2015) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 354 MET data determined based on WRF ARM version 4.0 Closing file MET_CRO_3D ======================================== |>--- RETRIEVE HORIZONTAL GRID ---<| ======================================== File "GRIDDESC" opened for input on unit: 98 /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/GRIDDESC ====================================== |>--- RETRIEVE VERTICAL GRID ---<| ====================================== "MET_CRO_3D" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/METCRO3D_20150526.nc" File type GRDDED3 Execution ID "mcip" Grid name "M_9_2015_CROSS" Dimensions: 74 rows, 98 cols, 38 lays, 16 vbles NetCDF ID: 65536 opened as READONLY Starting date and time 2015146:060000 (6:00:00 May 26, 2015) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 354 ========================================= |>--- RETRIEVE SPECIES NAMELIST ---<| ========================================= =========================================== |>--- INITIALIZE PROCESS ANALYSIS ---<| =========================================== PA_DATAGEN: Process Analysis is activated File "PACM_INFILE" opened for input on unit: 94 /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/CCTM/scripts/BLD_CCTM_v531_bisheng/pa_cb6r3_ae7_aq.ctl Entering the Process Analysis error checking routine WARNING: The following rxsums were defined but not used: RXSUM 1: PNAHO2cyc RXSUM 4: MEPXcyc RXSUM 5: ROOHcyc RXSUM 8: HOXcyc RXSUM 9: HCO3cyc No input errors detected, continuing.... WARNING: output file already exists: PACM_REPORT /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/PA_REPORT.20150526 File "PACM_REPORT" opened for output on unit: 93 /USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/PA_REPORT.20150526 End of initial Process Analysis Control data generation ================================== |>--- CONFIGURE SCENARIO ---<| ================================== INIT_MEDC_1 :notused >>--->> WARNING in subroutine OPEN3 File not available. "GRID_CRO_2D" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/GRIDCRO2D_20150526.nc" File type GRDDED3 Execution ID "mcip" Grid name "M_9_2015_CROSS" Dimensions: 74 rows, 98 cols, 1 lays, 7 vbles NetCDF ID: 131072 opened as READONLY Time-independent data. "GRID_DOT_2D" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/GRIDDOT2D_20150526.nc" File type GRDDED3 Execution ID "mcip" Grid name "M_9_2015_DOT" Dimensions: 75 rows, 99 cols, 1 lays, 9 vbles NetCDF ID: 196608 opened as READONLY Time-independent data. "LUFRAC_CRO" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/LUFRAC_CRO_20150526.nc" File type GRDDED3 Execution ID "mcip" Grid name "M_9_2015_CROSS" Dimensions: 74 rows, 98 cols, 21 lays, 1 vbles NetCDF ID: 262144 opened as READONLY Time-independent data. "MET_CRO_2D" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/METCRO2D_20150526.nc" File type GRDDED3 Execution ID "mcip" Grid name "M_9_2015_CROSS" Dimensions: 74 rows, 98 cols, 1 lays, 35 vbles NetCDF ID: 327680 opened as READONLY Starting date and time 2015146:060000 (6:00:00 May 26, 2015) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 354 "MET_DOT_3D" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/METDOT3D_20150526.nc" File type GRDDED3 Execution ID "mcip" Grid name "M_9_2015_DOT" Dimensions: 75 rows, 99 cols, 38 lays, 6 vbles NetCDF ID: 393216 opened as READONLY Starting date and time 2015146:060000 (6:00:00 May 26, 2015) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 354 "GR_EMIS_001" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/emis/20150526_emi.nc" File type GRDDED3 Execution ID "mcip" Grid name "CMAQ Emissions" Dimensions: 74 rows, 98 cols, 1 lays, 42 vbles NetCDF ID: 458752 opened as READONLY Starting date and time 2015146:080000 (8:00:00 May 26, 2015) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 GR_EM_SYM_DATE_0 | F "GR_EMIS_002" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/emis/meganout.20150526_d02_bk.ncf" File type GRDDED3 Execution ID "????????????????" Grid name "M_9_2015_CROSS" Dimensions: 74 rows, 98 cols, 1 lays, 25 vbles NetCDF ID: 524288 opened as READONLY Starting date and time 2015146:060000 (6:00:00 May 26, 2015) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 336 GR_EM_SYM_DATE_0 | F "INIT_CONC_1" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/icon/ICON_v53_20150526_profile_20150526" File type GRDDED3 Execution ID "ICON_v53.exe" Grid name "M_9_2015" Dimensions: 74 rows, 98 cols, 38 lays, 109 vbles NetCDF ID: 589824 opened as READONLY Time-independent data. Number of Emissions Layers: 1 out of total Number of Model Layers: 38 "MET_BDY_3D" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/METBDY3D_20150526.nc" File type BNDARY3 Execution ID "mcip" Grid name "M_9_2015_CROSS" Dimensions: 74 rows, 98 cols, 38 lays, 16 vbles, 1 cells thick NetCDF ID: 655360 opened as READONLY Starting date and time 2015146:060000 (6:00:00 May 26, 2015) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 354 "BNDY_CONC_1" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/bcon/BCON_v53_20150526_profile_20150526" File type BNDARY3 Execution ID "BCON_v53.exe" Grid name "M_9_2015" Dimensions: 74 rows, 98 cols, 38 lays, 173 vbles, 1 cells thick NetCDF ID: 720896 opened as READONLY Time-independent data. Warning! Something went wrong while reading the GeneralSpecs section of the Emissions Control Namelist. Default values for this section will be assumed. Warning! Something went wrong while reading the ChemicalFamilies section of the Emissions Control Namelist. Default values for this section will be assumed. Warning! Something went wrong while reading the StreamFamilies section of the Emissions Control Namelist. Default values for this section will be assumed. Warning! Something went wrong while reading the RegionFamilies section of the Emissions Control Namelist. Default values for this section will be assumed. CTM_OCEAN_CHEM set to FALSE. Open ocean and surf zone fractions will be set to 0. There will be no oceanic halogen-mediated loss of ozone or sea spray aerosol emissions. ======================================= |>--- LOAD INITIAL CONDITIONS ---<| ======================================= Initial Condition Factors used for transported gas-phase (reactive) species 7 NO2 1.0000 8 NO 1.0000 No IC found for species O in INIT_CONC_1; set to 1.00E-30 9 O3 1.0000 21 NO3 1.0000 No IC found for species O1D in INIT_CONC_1; set to 1.00E-30 No IC found for species OH in INIT_CONC_1; set to 1.00E-30 45 HO2 1.0000 11 H2O2 1.0000 20 N2O5 1.0000 10 HNO3 1.0000 35 HONO 1.0000 No IC found for species PNA in INIT_CONC_1; set to 1.00E-30 5 SO2 1.0000 6 SULF 1.0000 No IC found for species SULRXN in INIT_CONC_1; set to 1.00E-30 No IC found for species C2O3 in INIT_CONC_1; set to 1.00E-30 No IC found for species MEO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species RO2 in INIT_CONC_1; set to 1.00E-30 22 PAN 1.0000 No IC found for species PACD in INIT_CONC_1; set to 1.00E-30 No IC found for species AACD in INIT_CONC_1; set to 1.00E-30 No IC found for species CXO3 in INIT_CONC_1; set to 1.00E-30 No IC found for species ALD2 in INIT_CONC_1; set to 1.00E-30 No IC found for species XO2H in INIT_CONC_1; set to 1.00E-30 No IC found for species PANX in INIT_CONC_1; set to 1.00E-30 No IC found for species FORM in INIT_CONC_1; set to 1.00E-30 No IC found for species MEPX in INIT_CONC_1; set to 1.00E-30 No IC found for species MEOH in INIT_CONC_1; set to 1.00E-30 No IC found for species ROOH in INIT_CONC_1; set to 1.00E-30 No IC found for species XO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species XO2N in INIT_CONC_1; set to 1.00E-30 No IC found for species XPAR in INIT_CONC_1; set to 1.00E-30 No IC found for species XPRP in INIT_CONC_1; set to 1.00E-30 No IC found for species NTR1 in INIT_CONC_1; set to 1.00E-30 No IC found for species NTR2 in INIT_CONC_1; set to 1.00E-30 No IC found for species FACD in INIT_CONC_1; set to 1.00E-30 27 CO 1.0000 No IC found for species HCO3 in INIT_CONC_1; set to 1.00E-30 No IC found for species ALDX in INIT_CONC_1; set to 1.00E-30 No IC found for species GLYD in INIT_CONC_1; set to 1.00E-30 38 GLY 1.0000 39 MGLY 1.0000 No IC found for species ETHA in INIT_CONC_1; set to 1.00E-30 No IC found for species ETOH in INIT_CONC_1; set to 1.00E-30 37 KET 1.0000 No IC found for species PAR in INIT_CONC_1; set to 1.00E-30 No IC found for species ACET in INIT_CONC_1; set to 1.00E-30 No IC found for species PRPA in INIT_CONC_1; set to 1.00E-30 No IC found for species ROR in INIT_CONC_1; set to 1.00E-30 No IC found for species ETHY in INIT_CONC_1; set to 1.00E-30 26 ETH 1.0000 No IC found for species OLE in INIT_CONC_1; set to 1.00E-30 No IC found for species IOLE in INIT_CONC_1; set to 1.00E-30 No IC found for species ISOP in INIT_CONC_1; set to 1.00E-30 No IC found for species ISO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species ISOPRXN in INIT_CONC_1; set to 1.00E-30 No IC found for species ISPD in INIT_CONC_1; set to 1.00E-30 No IC found for species INTR in INIT_CONC_1; set to 1.00E-30 No IC found for species ISPX in INIT_CONC_1; set to 1.00E-30 No IC found for species HPLD in INIT_CONC_1; set to 1.00E-30 No IC found for species OPO3 in INIT_CONC_1; set to 1.00E-30 No IC found for species EPOX in INIT_CONC_1; set to 1.00E-30 No IC found for species IEPOXP in INIT_CONC_1; set to 1.00E-30 No IC found for species EPX2 in INIT_CONC_1; set to 1.00E-30 No IC found for species TERP in INIT_CONC_1; set to 1.00E-30 No IC found for species APIN in INIT_CONC_1; set to 1.00E-30 No IC found for species TERPNRO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species MTNO3 in INIT_CONC_1; set to 1.00E-30 No IC found for species TRPRXN in INIT_CONC_1; set to 1.00E-30 48 BENZENE 1.0000 No IC found for species CRES in INIT_CONC_1; set to 1.00E-30 No IC found for species BZO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species OPEN in INIT_CONC_1; set to 1.00E-30 No IC found for species BENZRO2 in INIT_CONC_1; set to 1.00E-30 31 TOL 1.0000 No IC found for species TO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species TOLRO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species XOPN in INIT_CONC_1; set to 1.00E-30 No IC found for species XYLMN in INIT_CONC_1; set to 1.00E-30 No IC found for species XLO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species XYLRO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species NAPH in INIT_CONC_1; set to 1.00E-30 No IC found for species PAHRO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species CRO in INIT_CONC_1; set to 1.00E-30 No IC found for species CAT1 in INIT_CONC_1; set to 1.00E-30 No IC found for species CRON in INIT_CONC_1; set to 1.00E-30 No IC found for species OPAN in INIT_CONC_1; set to 1.00E-30 No IC found for species ECH4 in INIT_CONC_1; set to 1.00E-30 No IC found for species CL2 in INIT_CONC_1; set to 1.00E-30 No IC found for species CL in INIT_CONC_1; set to 1.00E-30 No IC found for species HOCL in INIT_CONC_1; set to 1.00E-30 No IC found for species CLO in INIT_CONC_1; set to 1.00E-30 No IC found for species FMCL in INIT_CONC_1; set to 1.00E-30 No IC found for species HCL in INIT_CONC_1; set to 1.00E-30 No IC found for species CLNO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species CLNO3 in INIT_CONC_1; set to 1.00E-30 No IC found for species SESQ in INIT_CONC_1; set to 1.00E-30 No IC found for species SESQRXN in INIT_CONC_1; set to 1.00E-30 No IC found for species SOAALK in INIT_CONC_1; set to 1.00E-30 No IC found for species H2NO3PIJ in INIT_CONC_1; set to 1.00E-30 No IC found for species H2NO3PK in INIT_CONC_1; set to 1.00E-30 No IC found for species VLVPO1 in INIT_CONC_1; set to 1.00E-30 No IC found for species VSVPO1 in INIT_CONC_1; set to 1.00E-30 No IC found for species VSVPO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species VSVPO3 in INIT_CONC_1; set to 1.00E-30 No IC found for species VIVPO1 in INIT_CONC_1; set to 1.00E-30 No IC found for species VLVOO1 in INIT_CONC_1; set to 1.00E-30 No IC found for species VLVOO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species VSVOO1 in INIT_CONC_1; set to 1.00E-30 No IC found for species VSVOO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species VSVOO3 in INIT_CONC_1; set to 1.00E-30 No IC found for species PCVOC in INIT_CONC_1; set to 1.00E-30 No IC found for species PCSOARXN in INIT_CONC_1; set to 1.00E-30 No IC found for species FORM_PRIMARY in INIT_CONC_1; set to 1.00E-30 No IC found for species ALD2_PRIMARY in INIT_CONC_1; set to 1.00E-30 No IC found for species BUTADIENE13 in INIT_CONC_1; set to 1.00E-30 No IC found for species ACROLEIN in INIT_CONC_1; set to 1.00E-30 No IC found for species ACRO_PRIMARY in INIT_CONC_1; set to 1.00E-30 No IC found for species TOLU in INIT_CONC_1; set to 1.00E-30 67 HG 1.0000 No IC found for species HGIIAER in INIT_CONC_1; set to 1.00E-30 68 HGIIGAS 1.0000 No IC found for species SVAVB1 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVAVB2 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVAVB3 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVAVB4 in INIT_CONC_1; set to 1.00E-30 Initial Condition Factors used for transported aerosol species 50 ASO4J 1.0000 49 ASO4I 1.0000 No IC found for species ANH4J in INIT_CONC_1; set to 1.00E-30 No IC found for species ANH4I in INIT_CONC_1; set to 1.00E-30 No IC found for species ANO3J in INIT_CONC_1; set to 1.00E-30 No IC found for species ANO3I in INIT_CONC_1; set to 1.00E-30 83 AISO1J 1.0000 84 AISO2J 1.0000 86 ASQTJ 1.0000 No IC found for species AORGCJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AECJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AECI in INIT_CONC_1; set to 1.00E-30 No IC found for species AOTHRJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AOTHRI in INIT_CONC_1; set to 1.00E-30 No IC found for species AFEJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AALJ in INIT_CONC_1; set to 1.00E-30 No IC found for species ASIJ in INIT_CONC_1; set to 1.00E-30 No IC found for species ATIJ in INIT_CONC_1; set to 1.00E-30 No IC found for species ACAJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AMGJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AKJ in INIT_CONC_1; set to 1.00E-30 62 AMNJ 1.0000 54 ACORS 1.0000 53 ASOIL 1.0000 51 NUMATKN 1.0000 52 NUMACC 1.0000 55 NUMCOR 1.0000 64 SRFATKN 1.0000 65 SRFACC 1.0000 66 SRFCOR 1.0000 No IC found for species AORGH2OJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AH2OJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AH2OI in INIT_CONC_1; set to 1.00E-30 No IC found for species AH3OPJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AH3OPI in INIT_CONC_1; set to 1.00E-30 No IC found for species ANAJ in INIT_CONC_1; set to 1.00E-30 No IC found for species ANAI in INIT_CONC_1; set to 1.00E-30 No IC found for species ACLJ in INIT_CONC_1; set to 1.00E-30 No IC found for species ACLI in INIT_CONC_1; set to 1.00E-30 No IC found for species ASEACAT in INIT_CONC_1; set to 1.00E-30 No IC found for species ACLK in INIT_CONC_1; set to 1.00E-30 No IC found for species ASO4K in INIT_CONC_1; set to 1.00E-30 No IC found for species ANH4K in INIT_CONC_1; set to 1.00E-30 No IC found for species ANO3K in INIT_CONC_1; set to 1.00E-30 No IC found for species AH2OK in INIT_CONC_1; set to 1.00E-30 No IC found for species AH3OPK in INIT_CONC_1; set to 1.00E-30 85 AISO3J 1.0000 80 AOLGAJ 1.0000 87 AOLGBJ 1.0000 No IC found for species AGLYJ in INIT_CONC_1; set to 1.00E-30 No IC found for species AMTNO3J in INIT_CONC_1; set to 1.00E-30 No IC found for species AMTHYDJ in INIT_CONC_1; set to 1.00E-30 No IC found for species APOCI in INIT_CONC_1; set to 1.00E-30 No IC found for species APOCJ in INIT_CONC_1; set to 1.00E-30 No IC found for species APNCOMI in INIT_CONC_1; set to 1.00E-30 No IC found for species APNCOMJ in INIT_CONC_1; set to 1.00E-30 No IC found for species APCSOJ in INIT_CONC_1; set to 1.00E-30 No IC found for species ALVPO1I in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVPO1I in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVPO2I in INIT_CONC_1; set to 1.00E-30 No IC found for species ALVPO1J in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVPO1J in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVPO2J in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVPO3J in INIT_CONC_1; set to 1.00E-30 No IC found for species AIVPO1J in INIT_CONC_1; set to 1.00E-30 No IC found for species ALVOO1I in INIT_CONC_1; set to 1.00E-30 No IC found for species ALVOO2I in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVOO1I in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVOO2I in INIT_CONC_1; set to 1.00E-30 No IC found for species ALVOO1J in INIT_CONC_1; set to 1.00E-30 No IC found for species ALVOO2J in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVOO1J in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVOO2J in INIT_CONC_1; set to 1.00E-30 No IC found for species ASVOO3J in INIT_CONC_1; set to 1.00E-30 No IC found for species AAVB1J in INIT_CONC_1; set to 1.00E-30 No IC found for species AAVB2J in INIT_CONC_1; set to 1.00E-30 No IC found for species AAVB3J in INIT_CONC_1; set to 1.00E-30 No IC found for species AAVB4J in INIT_CONC_1; set to 1.00E-30 No IC found for species AMT1J in INIT_CONC_1; set to 1.00E-30 No IC found for species AMT2J in INIT_CONC_1; set to 1.00E-30 No IC found for species AMT3J in INIT_CONC_1; set to 1.00E-30 No IC found for species AMT4J in INIT_CONC_1; set to 1.00E-30 No IC found for species AMT5J in INIT_CONC_1; set to 1.00E-30 No IC found for species AMT6J in INIT_CONC_1; set to 1.00E-30 |> Check Aerosol IC Size Distributions: +======================================== |> Map Aerosol Species: +======================== Optional Species APHGJ Not found in AE namelist. ATTENTION: Applying fix to aerosol Initial Conditions for aerosol modes. Set verbose_loadcgrid preprocessor flag to learn more. Initial Condition Factors used for transported non-reactive gas species 19 NH3 1.0000 No IC found for species SVISO1 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVISO2 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVSQT in INIT_CONC_1; set to 1.00E-30 No IC found for species LVPCSOG in INIT_CONC_1; set to 1.00E-30 No IC found for species SVMT1 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVMT2 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVMT3 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVMT4 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVMT5 in INIT_CONC_1; set to 1.00E-30 No IC found for species SVMT6 in INIT_CONC_1; set to 1.00E-30 ================================================= |>--- OPEN OR CREATE CONCENTRATION FILE ---<| ================================================= CTM_CONC_1 :/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/CCTM_CONC_v531_bisheng_M_9_2015_20150526.nc >>--->> WARNING in subroutine OPEN3 File not available. Could not open CTM_CONC_1 for update - try to open new Conc File Header Description: Concentration file output From CMAQ model dyn alloc version CTM Set of variables (possibly) reduced from CGRID For next scenario continuation runs, use the "one-step" CGRID file Layer 1 to 1 Layer 2 to 2 Layer 3 to 3 Layer 4 to 4 Layer 5 to 5 Layer 6 to 6 Layer 7 to 7 Layer 8 to 8 Layer 9 to 9 Layer 10 to 10 Layer 11 to 11 Layer 12 to 12 Layer 13 to 13 Layer 14 to 14 Layer 15 to 15 Layer 16 to 16 Layer 17 to 17 Layer 18 to 18 Layer 19 to 19 Layer 20 to 20 Layer 21 to 21 Layer 22 to 22 Layer 23 to 23 Layer 24 to 24 Layer 25 to 25 Layer 26 to 26 Layer 27 to 27 Layer 28 to 28 Layer 29 to 29 Layer 30 to 30 Layer 31 to 31 Layer 32 to 32 Layer 33 to 33 Layer 34 to 34 Layer 35 to 35 Layer 36 to 36 Layer 37 to 37 Layer 38 to 38 Gas Chem species saved to CONC file: 1 ( 1) NO2 2 ( 2) NO 3 ( 3) O 4 ( 4) O3 5 ( 5) NO3 6 ( 6) O1D 7 ( 7) OH 8 ( 8) HO2 9 ( 9) H2O2 10 ( 10) N2O5 11 ( 11) HNO3 12 ( 12) HONO 13 ( 13) PNA 14 ( 14) SO2 15 ( 15) SULF 16 ( 16) C2O3 17 ( 17) MEO2 18 ( 18) RO2 19 ( 19) PAN 20 ( 20) PACD 21 ( 21) AACD 22 ( 22) CXO3 23 ( 23) ALD2 24 ( 24) XO2H 25 ( 25) PANX 26 ( 26) FORM 27 ( 27) MEPX 28 ( 28) MEOH 29 ( 29) ROOH 30 ( 30) XO2 31 ( 31) XO2N 32 ( 32) XPAR 33 ( 33) XPRP 34 ( 34) NTR1 35 ( 35) NTR2 36 ( 36) FACD 37 ( 37) CO 38 ( 38) HCO3 39 ( 39) ALDX 40 ( 40) GLYD 41 ( 41) GLY 42 ( 42) MGLY 43 ( 43) ETHA 44 ( 44) ETOH 45 ( 45) KET 46 ( 46) PAR 47 ( 47) ACET 48 ( 48) PRPA 49 ( 49) ROR 50 ( 50) ETHY 51 ( 51) ETH 52 ( 52) OLE 53 ( 53) IOLE 54 ( 54) ISOP 55 ( 55) ISO2 56 ( 56) ISPD 57 ( 57) INTR 58 ( 58) ISPX 59 ( 59) HPLD 60 ( 60) OPO3 61 ( 61) EPOX 62 ( 62) IEPOXP 63 ( 63) EPX2 64 ( 64) TERP 65 ( 65) APIN 66 ( 66) TERPNRO2 67 ( 67) MTNO3 68 ( 68) BENZENE 69 ( 69) CRES 70 ( 70) BZO2 71 ( 71) OPEN 72 ( 72) BENZRO2 73 ( 73) TOL 74 ( 74) TO2 75 ( 75) TOLRO2 76 ( 76) XOPN 77 ( 77) XYLMN 78 ( 78) XLO2 79 ( 79) XYLRO2 80 ( 80) NAPH 81 ( 81) PAHRO2 82 ( 82) CRO 83 ( 83) CAT1 84 ( 84) CRON 85 ( 85) OPAN 86 ( 86) ECH4 87 ( 87) CL2 88 ( 88) CL 89 ( 89) HOCL 90 ( 90) CLO 91 ( 91) FMCL 92 ( 92) HCL 93 ( 93) CLNO2 94 ( 94) CLNO3 95 ( 95) SESQ 96 ( 96) SOAALK 97 ( 97) H2NO3PIJ 98 ( 98) H2NO3PK 99 ( 99) VLVPO1 100 (100) VSVPO1 101 (101) VSVPO2 102 (102) VSVPO3 103 (103) VIVPO1 104 (104) VLVOO1 105 (105) VLVOO2 106 (106) VSVOO1 107 (107) VSVOO2 108 (108) VSVOO3 109 (109) PCVOC 110 (110) FORM_PRIMARY 111 (111) ALD2_PRIMARY 112 (112) BUTADIENE13 113 (113) ACROLEIN 114 (114) ACRO_PRIMARY 115 (115) TOLU 116 (116) HG 117 (117) HGIIGAS 118 (118) SVAVB1 119 (119) SVAVB2 120 (120) SVAVB3 121 (121) SVAVB4 Aerosol species saved to CONC file: 1 (122) ASO4J 2 (123) ASO4I 3 (124) ANH4J 4 (125) ANH4I 5 (126) ANO3J 6 (127) ANO3I 7 (128) AISO1J 8 (129) AISO2J 9 (130) ASQTJ 10 (131) AORGCJ 11 (132) AECJ 12 (133) AECI 13 (134) AOTHRJ 14 (135) AOTHRI 15 (136) AFEJ 16 (137) AALJ 17 (138) ASIJ 18 (139) ATIJ 19 (140) ACAJ 20 (141) AMGJ 21 (142) AKJ 22 (143) AMNJ 23 (144) ACORS 24 (145) ASOIL 25 (146) NUMATKN 26 (147) NUMACC 27 (148) NUMCOR 28 (149) SRFATKN 29 (150) SRFACC 30 (151) SRFCOR 31 (152) AORGH2OJ 32 (153) AH2OJ 33 (154) AH2OI 34 (155) AH3OPJ 35 (156) AH3OPI 36 (157) ANAJ 37 (158) ANAI 38 (159) ACLJ 39 (160) ACLI 40 (161) ASEACAT 41 (162) ACLK 42 (163) ASO4K 43 (164) ANH4K 44 (165) ANO3K 45 (166) AH2OK 46 (167) AH3OPK 47 (168) AISO3J 48 (169) AOLGAJ 49 (170) AOLGBJ 50 (171) AGLYJ 51 (172) AMTNO3J 52 (173) AMTHYDJ 53 (174) APOCI 54 (175) APOCJ 55 (176) APNCOMI 56 (177) APNCOMJ 57 (178) APCSOJ 58 (179) ALVPO1I 59 (180) ASVPO1I 60 (181) ASVPO2I 61 (182) ALVPO1J 62 (183) ASVPO1J 63 (184) ASVPO2J 64 (185) ASVPO3J 65 (186) AIVPO1J 66 (187) ALVOO1I 67 (188) ALVOO2I 68 (189) ASVOO1I 69 (190) ASVOO2I 70 (191) ALVOO1J 71 (192) ALVOO2J 72 (193) ASVOO1J 73 (194) ASVOO2J 74 (195) ASVOO3J 75 (196) AAVB1J 76 (197) AAVB2J 77 (198) AAVB3J 78 (199) AAVB4J 79 (200) AMT1J 80 (201) AMT2J 81 (202) AMT3J 82 (203) AMT4J 83 (204) AMT5J 84 (205) AMT6J Non-reactive species saved to CONC file: 1 (206) NH3 2 (207) SVISO1 3 (208) SVISO2 4 (209) SVSQT 5 (210) LVPCSOG 6 (211) SVMT1 7 (212) SVMT2 8 (213) SVMT3 9 (214) SVMT4 10 (215) SVMT5 11 (216) SVMT6 Timestep written to CTM_CONC_1 for date and time 2015146:080000 from timestep on initial data files for date and time 2015146:080000 ========================================================= |>--- OPEN OR CREATE AVERAGE CONCENTRATION FILE ---<| ========================================================= A_CONC_1 :/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/CCTM_ACONC_v531_bisheng_M_9_2015_20150526.nc >>--->> WARNING in subroutine OPEN3 File not available. Could not open A_CONC_1 file for update - try to open new ================================================== |>--- OPEN OR CREATE WET DEPOSITION FILE ---<| ================================================== ============================================ |>--- CHECK INITIAL CONCENTRATIONS ---<| ============================================ After INITSCEN : Gas 1.054E-28 | Aer 8.882E-13 | Non 9.998E-30 Value for CTM_IPR_1: '/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/CCTM_PA_1_v531_bisheng_M_9_2015_20150526.nc -v' Value for CTM_IPR_1: '/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/CCTM_PA_1_v531_bisheng_M_9_2015_20150526.nc -v' Value for CTM_IRR_1: '/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/CCTM_IRR_1_v531_bisheng_M_9_2015_20150526.nc -v' Value for CTM_IRR_1: '/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/output_CCTM/CCTM_IRR_1_v531_bisheng_M_9_2015_20150526.nc -v' ======================================== |>--- CHECK INPUT FILE HEADERS ---<| ======================================== Checking header data for file: GRID_DOT_2D Checking header data for file: GRID_CRO_2D "GRID_BDY_2D" opened as OLD:READ-ONLY File name "/USERDATA/research/dengt/zhangx/CMAQ-5.3.1/data/mcip/M_9_2015/GRIDBDY2D_20150526.nc" File type BNDARY3 Execution ID "mcip" Grid name "M_9_2015_CROSS" Dimensions: 74 rows, 98 cols, 1 lays, 7 vbles, 1 cells thick NetCDF ID: 786432 opened as READONLY Time-independent data. Checking header data for file: GRID_BDY_2D Checking header data for file: LUFRAC_CRO Checking header data for file: MET_BDY_3D Checking header data for file: MET_DOT_3D Checking header data for file: MET_CRO_2D Checking header data for file: MET_CRO_3D Checking header data for file: INIT_CONC_1 Checking header data for file: BNDY_CONC_1 No inconsistent header data found on input files ============================================= |>--- INITIALIZE ADVECTION STEPPING ---<| ============================================= Top layer thru which sync step determined: 23 Computed synchronization step (HHMMSS): 000500 Number of Synchronization steps: 12 Layer Advection per Sync Step (HHMMSS) Step 38 000500 1 37 000500 1 36 000500 1 35 000500 1 34 000500 1 33 000500 1 32 000500 1 31 000500 1 30 000500 1 29 000500 1 28 000500 1 27 000500 1 26 000500 1 25 000500 1 24 000500 1 23 000500 1 22 000500 1 21 000500 1 20 000500 1 19 000500 1 18 000500 1 17 000500 1 16 000500 1 15 000500 1 14 000500 1 13 000500 1 12 000500 1 11 000500 1 10 000500 1 9 000500 1 8 000500 1 7 000500 1 6 000500 1 5 000500 1 4 000500 1 3 000500 1 2 000500 1 1 000500 1 Processing Day/Time [YYYYDDD:HHMMSS]: 2015146:080000 Which is Equivalent to (UTC): 8:00:00 Tuesday, May 26, 2015 Time-Step Length (HHMMSS): 000500 ================================================== |>--- INITIALIZE SURFACE EXCHANGE MODULE ---<| ================================================== DEPV_INIT: completed INIT_GAS_DV block =========================================== |>--- INITIALIZE EMISSIONS MODULE ---<| =========================================== EMISDIAG_SUM | F GR_EMIS_LAB_001 | GRIDDED_EMIS GR_EMIS_APPLY_00 | T (default) GR_EM_SYM_DATE_0 | F GR_EMIS_DIAG_001 | FALSE (default) GR_EMIS_LAB_002 | GRIDDED_EMIS GR_EMIS_APPLY_00 | T (default) GR_EM_SYM_DATE_0 | F GR_EMIS_DIAG_002 | FALSE (default) |> Open Gridded Emissions: +=========================== Number of Emissions Layers: 1 out of total Number of Model Layers: 38 |> Initialize Point Emissions: +=============================== |> Initialize Biogenic Emissions: +================================== |> Initialize Online Biogenic VOC Emissions Module (BEIS): +=========================================================== |> Initialize Marine Gas Emissions: +==================================== |> Initialize Lightning NO Emissions: +====================================== |> Process Aerosol Emissions: +============================== Map SOA Precursors Note: Optional species ALK5RXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species ALKRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species TOLNRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species TOLHRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species XYLNRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species XYLHRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species BNZNRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species BNZHRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species PAHNRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. Note: Optional species PAHHRXN is not found in G2AE or N2AE values of the GC or NR namelist. Simulation will ignore this species. |> Check Emissions Mapping: +============================ ============================================================================= |> SCALING EMISSIONS CONSISTENT WITH EMISSIONS CONTROL FILE SUPPLIED BY USER ============================================================================= |> Regions Available for Scaling: ================================= Number Region Label File Label Variable ------ ------------ ---------- -------- 1 EVERYWHERE N/A N/A |> Map Available Emissions Surrogates to Defaults: ================================================== |> Checking Emissions Surrogate Units: ======================================