***testing*** SRGPRO_PATH set by SRGPRO input: /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/gridding/surrogates/CONUS12_2014_30apr2019/ Linux2_x86_64ifort 20160701 NOTE: Default MONTH setting to 'jan' SCRIPT NOTE: Setting months with no partial months Creating dataset /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/speciation/2016fh_16j/gspro_rail_cmaq_saprc_2016fh_16j_5.txt using script combine_data.csh Processing environment variables GSPROTMP_A Including file: /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/speciation/gspro_SAPRC07TC_AE7_SPECIATE_5_1.txt Creating dataset /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/speciation/2016fh_16j/gsref_rail_cmaq_saprc_2016fh_16j_16j.txt using script combine_data.csh Processing environment variables GSREFTMP_A Including file: /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/speciation/2016fh_16j/gsref_cmaq_cb6_2016fh_16j_nf.txt ***testing*** SRGPRO_PATH set by SRGPRO input: /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/gridding/surrogates/CONUS12_2014_30apr2019/ Linux2_x86_64ifort 20160701 Creating dataset /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/inputs/rail/arinv_rail_2016fh_16j.lst using script combine_data.csh Processing environment variables EMISINV_D EMISINV_C EMISINV_B EMISINV_A SCRIPT NOTE: Scanning GSREF for duplicate records SCRIPT NOTE: No duplicates found in /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/speciation/2016fh_16j/gsref_rail_cmaq_saprc_2016fh_16j_16j.txt SCRIPT NOTE: Scanning AGREF for duplicate records SCRIPT NOTE: No duplicates found in /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/gridding/agref_us_2014platform_21aug2019_nf_v17.txt SCRIPT NOTE: Scanning ATREF for duplicate records SCRIPT NOTE: No duplicates found in /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/temporal/amptref_general_2014platform_tref_21aug2019_nf_v17 Running part 1... This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ SMOKE --------------- Copyright (c)2004 Environmental Modeling for Policy Development All rights reserved Program SMKINVEN, Version SMOKEv4.8_Oct2020 Online documentation http://www.cep.unc.edu/empd/products/smoke Program SMKINVEN to take ASCII area or point source files in IDA, EMS-95, or SMOKE list format, or mobile files in IDA format, and produce the I/O API and ASCII SMOKE inventory files and list of unique SCCs in the inventory. You will need to enter the logical names for the input and output files (and to have set them prior to program start, using "setenv "). You may use END_OF-FILE (control-D) to quit the program during logical-name entry. Default responses are given in brackets [LIKE THIS] and can be accepted by hitting the key. 2.027u 0.192s 0:02.85 77.5% 0+0k 67336+6392io 1pf+0w now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/logs/smkinven_rail_2016fh_16j.log This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ SMOKE --------------- Copyright (c)2004 Environmental Modeling for Policy Development All rights reserved Program SPCMAT, Version SMOKEv4.8_Oct2020 Online documentation http://www.cep.unc.edu/empd/products/smoke Program SPCMAT to take a SMOKE area, mobile, or point source inventory file, a speciation profiles file, a speciation cross-reference file, an optional pollutant-to-pollutant, conversion file, and produce mass-based and/or mole-based SMOKE speciation matrices for all inventory pollutants using run-time defined combinations of pollutants and model species. The output species are defined at run time by the speciation profiles file, permitting support of any chemical mechanism. You will need to enter the logical names for the input and output files (and to have set them prior to program start, using "setenv "). You may use END_OF-FILE (control-D) to quit the program during logical-name entry. Default responses are given in brackets [LIKE THIS] and can be accepted by hitting the key. 5.749u 0.068s 0:05.93 97.8% 0+0k 45832+16216io 1pf+0w now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/logs/spcmat_rail_2016fh_16j_cmaq_saprc.log This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ SMOKE --------------- Copyright (c)2004 Environmental Modeling for Policy Development All rights reserved Program GRDMAT, Version SMOKEv4.8_Oct2020 Online documentation http://www.cep.unc.edu/empd/products/smoke Program GRDMAT to take a SMOKE area, mobile, or point source inventory file, gridding surrogates, surrogate cross- reference, and an optional link definitions file, and produce a SMOKE gridding matrix for a grid defined at run time. For mobile sources, an "ungridding" matrix is also created to allow the use of gridded temperature data in assigning factors to mobile sources. You will need to enter the logical names for the input and output files (and to have set them prior to program start, using "setenv "). You may use END_OF-FILE (control-D) to quit the program during logical-name entry. Default responses are given in brackets [LIKE THIS] and can be accepted by hitting the key. 5.768u 2.798s 0:22.69 37.6% 0+0k 841128+4968io 1pf+0w now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/logs/grdmat_rail_2016fh_16j_US_12km.log This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ SMOKE --------------- Copyright (c)2004 Environmental Modeling for Policy Development All rights reserved Program SMKREPORT, Version SMOKEv4.8_Oct2020 Online documentation http://www.cep.unc.edu/empd/products/smoke Program SMKREPORT to take any combination of SMOKE intermed- iate files (but at least an inventory file) and generate one or more user-defined reports in any combination of output files. You will need to enter the logical names for the input and output files (and to have set them prior to program start, using "setenv "). You may use END_OF-FILE (control-D) to quit the program during logical-name entry. Default responses are given in brackets [LIKE THIS] and can be accepted by hitting the key. 1.015u 0.089s 0:01.39 78.4% 0+0k 50000+23344io 1pf+0w now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/logs/smkreport_rail_2016fh_16j_inv.log This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ SMOKE --------------- Copyright (c)2004 Environmental Modeling for Policy Development All rights reserved Program SMKREPORT, Version SMOKEv4.8_Oct2020 Online documentation http://www.cep.unc.edu/empd/products/smoke Program SMKREPORT to take any combination of SMOKE intermed- iate files (but at least an inventory file) and generate one or more user-defined reports in any combination of output files. You will need to enter the logical names for the input and output files (and to have set them prior to program start, using "setenv "). You may use END_OF-FILE (control-D) to quit the program during logical-name entry. Default responses are given in brackets [LIKE THIS] and can be accepted by hitting the key. 0.335u 0.040s 0:00.50 74.0% 0+0k 8+720io 0pf+0w SCRIPT NOTE: timetracker is replacing line 2 of the TIMELOG file now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/logs/smkreport_rail_2016fh_16j_inv2.log This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ SMOKE --------------- Copyright (c)2004 Environmental Modeling for Policy Development All rights reserved Program SMKREPORT, Version SMOKEv4.8_Oct2020 Online documentation http://www.cep.unc.edu/empd/products/smoke Program SMKREPORT to take any combination of SMOKE intermed- iate files (but at least an inventory file) and generate one or more user-defined reports in any combination of output files. You will need to enter the logical names for the input and output files (and to have set them prior to program start, using "setenv "). You may use END_OF-FILE (control-D) to quit the program during logical-name entry. Default responses are given in brackets [LIKE THIS] and can be accepted by hitting the key. 5.581u 0.246s 0:06.25 93.1% 0+0k 8+185496io 0pf+0w SCRIPT NOTE: timetracker is replacing line 2 of the TIMELOG file now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/logs/smkreport_rail_2016fh_16j_invgrid.log ***testing*** SRGPRO_PATH set by SRGPRO input: /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/gridding/surrogates/CONUS12_2014_30apr2019/ Linux2_x86_64ifort 20160701 SCRIPT WARNING: All 1 Temporal outputs not found for deletion ***testing*** SRGPRO_PATH set by SRGPRO input: /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/gridding/surrogates/CONUS12_2014_30apr2019/ Linux2_x86_64ifort 20160701 SCRIPT WARNING: All 1 Temporal outputs not found for deletion Running part 2, for 20160712 ... This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ SMOKE --------------- Copyright (c)2004 Environmental Modeling for Policy Development All rights reserved Program TEMPORAL, Version SMOKEv4.8_Oct2020 Online documentation http://www.cep.unc.edu/empd/products/smoke Program TEMPORAL to take a SMOKE area, mobile, or point source inventory file, a temporal profiles file, a temporal cross-reference file, an optional SMOKE day-specific file, and an optional SMOKE hour-specific point source file, and produce hourly low-level and optionally hourly elevated point source emissions for the requested episode. You will need to enter the logical names for the input and output files (and to have set them prior to program start, using "setenv "). You may use END_OF-FILE (control-D) to quit the program during logical-name entry. Default responses are given in brackets [LIKE THIS] and can be accepted by hitting the key. 2.185u 0.056s 0:02.47 90.2% 0+0k 46880+20464io 1pf+0w now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/logs/temporal_rail_2016fh_16j_20160712.log Number of dates to run for jul : 1 ***testing*** SRGPRO_PATH set by SRGPRO input: /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/gridding/surrogates/CONUS12_2014_30apr2019/ Linux2_x86_64ifort 20160701 ***testing*** SRGPRO_PATH set by SRGPRO input: /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//ge_dat/gridding/surrogates/CONUS12_2014_30apr2019/ Linux2_x86_64ifort 20160701 Running part 4, for 20160712... This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ SMOKE --------------- Copyright (c)2004 Environmental Modeling for Policy Development All rights reserved Program SMKMERGE, Version SMOKEv4.8_Oct2020 Online documentation http://www.cep.unc.edu/empd/products/smoke Program SMKMERGE to merge the inventory or hourly emission files with gridding matrices and with optionally any combination of speciation matrices, multiplicative control matrices, additive control matrices, or reactivity control matrices. The program can operate on one to four source categories (area, biogenic, mobile, or point sources), or any combination of these. Gridded and/or state reports and/or county reports can be written from this program. If a layer- fractions file is input, then the total emissions output file is three-dimensional. You will need to enter the logical names for the input and output files (and to have set them prior to program start, using "setenv "). You may use END_OF-FILE (control-D) to quit the program during logical-name entry. Default responses are given in brackets [LIKE THIS] and can be accepted by hitting the key. at time 0:00:00 at time 1:00:00 at time 2:00:00 at time 3:00:00 at time 4:00:00 at time 5:00:00 at time 6:00:00 at time 7:00:00 at time 8:00:00 at time 9:00:00 at time 10:00:00 at time 11:00:00 at time 12:00:00 at time 13:00:00 at time 14:00:00 at time 15:00:00 at time 16:00:00 at time 17:00:00 at time 18:00:00 at time 19:00:00 at time 20:00:00 at time 21:00:00 at time 22:00:00 at time 23:00:00 at time 0:00:00 11.249u 1.747s 0:13.12 98.9% 0+0k 47024+5815784io 1pf+0w now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/logs/smkmerge_rail_2016fh_16j_20160712_US_12km_cmaq_saprc.log Now running M3STAT This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ netCDF version 4.1.3 of Jun 18 2021 13:27:00 $ Program M3STAT to compute statistics of selected variables from a user-specified GRIDDED, BOUNDARY, CUSTOM, IDDATA, or SPARSE-MATRIX Models-3 file. You need to have assigned a logical name to the physical file name of the input file, and optionally the report file according to Models-3 conventions, using the operation "setenv ". You will have the choice of either the default analysis, which computes statistics for the variables in the file, or customized analysis in which you select lists of variables to be analyzed, and the thresholds to be applied to each. USAGE: m3stat [INFILE [REPORTFILE]] [DEFAULT] (and then answer the prompts). Note that RUNLEN=0 for single-step runs ("fenceposts"...) See URL https://www.cmascenter.org/ioapi/documentation/3.1/html#tools Program copyright (C) 1992-2002 MCNC, (C) 1995-2013 Carlie J. Coats, Jr., and (C) 2002-2010 Baron Advanced Meteorological Systems, LLC. Released under Version 2 of the GNU General Public License. See enclosed GPL.txt, or URL http://www.gnu.org/copyleft/gpl.html Comments and questions are welcome and can be sent to Carlie J. Coats, Jr. carlie@jyarborough.com or UNC Institute for the Environment 137 E. Franklin St. Suite 602 Room 613-C Campus Box 1105 Chapel Hill, NC 27599-1105 Program version: $Id:: m3stat.f 117 2019-06-15 14:56:29Z coats $ now checking log file /scratch/general/lustre/copycky/data/nei/2016/air/emismod/2016/v1//2016fh_16j/intermed/rail/m3stat_logs/m3stat_rail_20160712_US_12km_cmaq_saprc_2016fh_16j.log SCRIPT NOTE: Registration of Smkreport temporal reports is currently automatically turned off because these reports are no longer being generated. SCRIPT NOTE: Not registering Smkmerge reports because only found 1 Smkmerge reports out of expected 12 log analyzer Getting message data (might take some time).... Finished getting data Classifying message types... Total number of known messages: 1156 Total number of unknown messages: 2 Level 3 analysis... Finished classifying message types log analyzer Getting message data (might take some time).... Finished getting data Classifying message types... Total number of known messages: 1156 Total number of unknown messages: 2 Level 1 analysis... Finished classifying message types Testing for exit priority <= 1 ERROR: At least one message's priority is less than or equal to the exit priority: 1 ERROR: Level 1 errors or Level 0 warnings found. Check log files, fix inputs, and rerun.