model CCTM_v531.exe; repo /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/src; mechanism cb6r3_ae7_aq; lib_base /CAMData/CMAQ/Libraries; lib_1 ioapi-3.2/Linux2_x86_64gfort; lib_2 ioapi-3.2/ioapi/fixed_src; lib_3 "mpi -I."; lib_4 ioapi-3.2/ioapi/lib; cpp_flags " -Dparallel -Dm3dry_opt -DSUBST_BARRIER=SE_BARRIER -DSUBST_GLOBAL_MAX=SE_GLOBAL_MAX -DSUBST_GLOBAL_MIN=SE_GLOBAL_MIN -DSUBST_GLOBAL_MIN_DATA=SE_GLOBAL_MIN_DATA -DSUBST_GLOBAL_TO_LOCAL_COORD=SE_GLOBAL_TO_LOCAL_COORD -DSUBST_GLOBAL_SUM=SE_GLOBAL_SUM -DSUBST_GLOBAL_LOGICAL=SE_GLOBAL_LOGICAL -DSUBST_LOOP_INDEX=SE_LOOP_INDEX -DSUBST_SUBGRID_INDEX=SE_SUBGRID_INDEX -DSUBST_HI_LO_BND_PE=SE_HI_LO_BND_PE -DSUBST_SUM_CHK=SE_SUM_CHK -DSUBST_SE_INIT=SE_INIT -DSUBST_INIT_ARRAY=SE_INIT_ARRAY -DSUBST_COMM=SE_COMM -DSUBST_MY_REGION=SE_MY_REGION -DSUBST_SLICE=SE_SLICE -DSUBST_GATHER=SE_GATHER -DSUBST_DATA_COPY=SE_DATA_COPY -DSUBST_IN_SYN=SE_IN_SYN"; f_compiler mpif90; fstd "-O3 -funroll-loops -finit-character=32 -Wtabs -Wsurprising -march=native -ftree-vectorize -ftree-loop-if-convert -finline-limit=512"; dbg "-Wall -O0 -g -fcheck=all -ffpe-trap=invalid,zero,overflow -fbacktrace"; f_flags "-ffixed-form -ffixed-line-length-132 -funroll-loops -finit-character=32"; f90_flags "-ffree-form -ffree-line-length-none -funroll-loops -finit-character=32"; c_compiler gcc; c_flags "-O2 -DFLDMN -I"; link_flags ""; ioapi "-lioapi"; netcdf "-lnetcdf"; netcdff "-lnetcdff"; mpich "-lmpi "; include SUBST_PE_COMM ./PE_COMM.EXT; include SUBST_CONST ./CONST.EXT; include SUBST_FILES_ID ./FILES_CTM.EXT; include SUBST_EMISPRM ./EMISPRM.EXT; // Parallel / Include message passing definitions include SUBST_MPI ./mpif.h; // options are stenex or se_noop Module STENEX/se; // parallel executable; stenex and pario included Module PARIO; // options are par, par_nodistr and par_noop Module par/mpi; // options are driver Module driver; // options are cartesian Module grid/cartesian; // options are Init Module init; // options are gencoor_wrf_cons and gencoor_local_cons Module couple/gencoor_wrf_cons; // options are ppm Module hadv/ppm; // options are wrf_cons and local_cons Module vadv/wrf_cons; // options are multiscale Module hdiff/multiscale; // options are acm2_m3dry or acm2_stage Module vdiff/acm2_m3dry; // options are m3dry or stage Module depv/m3dry; // options are emis Module emis/emis; // options are beis3 Module biog/beis3; // options are smoke Module plrise/smoke; // options are cgrid_spcs_nml and cgrid_spcs_icl Module spcs/cgrid_spcs_nml; // options are inline and table Module phot/inline; // gas chemistry solvers // options are smvgear, ros3, and ebi_; see 'gas chemistry mechanisms' for Module gas/ebi_cb6r3_ae7_aq; // gas chemistry mechanisms // options are cb6mp_ae6_aq, cb6r3_ae6_aq, cb6r3_ae7_aq, cb6r3_ae7_aqkmt2, cb6r3m_ae7_kmtbr, racm2_ae6_aq, saprc07tc_ae6_aq, saprc07tic_ae6i_aq, saprc07tic_ae6i_aqkmti, saprc07tic_ae7i_aq, saprc07tic_ae7i_aqkmt2 Module MECHS/cb6r3_ae7_aq; // tracer modules // options are trac0, trac1 Module MECHS/trac0; // options are aero6 Module aero/aero7; // options are acm_ae6, acm_ae6_kmt, acm_ae7_kmt2, acm_ae6_mp, acm_ae7 Module cloud/acm_ae7; // compile for inline process analysis Module procan/pa; // compile for integrated source apportionment method Module isam; // options are util Module util/util; // options are diag Module diag; // options are stm Module stm; // options are cio Module cio; setenv WORKDIR /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts setenv OUTDIR /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS setenv INPDIR /CAMData/CMAQ/2016_12US1 setenv INPDIRa /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6 setenv INPDIRb /CAMData/2016_EPA_Platform setenv LOGDIR /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS setenv NMLpath /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc setenv NEW_START TRUE set START_DATE = 2016-06-01 set END_DATE = 2016-06-01 set STTIME = 000000 set NSTEPS = 240000 set TSTEP = 010000 if ( mpi == serial ) then @ NPCOL = 4 @ NPROW = 2 @ NPROCS = 4 * 2 setenv NPCOL_NPROW 4 2 endif set NZ = 35 setenv GRID_NAME 12US1 setenv GRIDDESC /CAMData/CMAQ/2016_12US1/GRIDDESC setenv AVG_CONC_SPCS ALL setenv ACONC_BLEV_ELEV 1 1 setenv AVG_FILE_ENDTIME N setenv EXECUTION_ID CCTM_v531.exe setenv CTM_MAXSYNC 300 setenv CTM_MINSYNC 60 setenv SIGMA_SYNC_TOP 0.7 setenv CTM_ADV_CFL 0.95 setenv CTM_SS_AERO Y setenv CTM_WB_DUST N setenv CTM_ERODE_AGLAND Y setenv CTM_WBDUST_BELD BELD3 setenv CTM_LTNG_NO N setenv CTM_WVEL Y setenv KZMIN Y setenv CTM_ILDEPV Y setenv CTM_MOSAIC N setenv CTM_FST N setenv PX_VERSION Y setenv CLM_VERSION N setenv NOAH_VERSION N setenv CTM_ABFLUX N setenv CTM_HGBIDI N setenv CTM_SFC_HONO Y setenv CTM_GRAV_SETL Y setenv CTM_BIOGEMIS Y setenv CTM_ZERO_PCSOA N setenv DOVERTEXT N setenv VERTLONLATPATH /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/lonlat.csv setenv CTM_PROCAN N setenv PA_BCOL_ECOL 10 320 setenv PA_BROW_EROW 10 195 setenv PA_BLEV_ELEV 1 4 setenv PRINT_PROC_TIME Y setenv IOAPI_LOG_WRITE F setenv FL_ERR_STOP N setenv PROMPTFLAG F setenv IOAPI_OFFSET_64 YES setenv CTM_EMISCHK N setenv EMISDIAG F setenv EMIS_DATE_OVRD N setenv CTM_PMDIAG N setenv CTM_APMDIAG Y setenv APMDIAG_BLEV_ELEV setenv CTM_CKSUM Y setenv CLD_DIAG Y setenv CTM_AERDIAG Y setenv CTM_PHOTDIAG Y setenv NLAYS_PHOTDIAG 3 setenv CTM_SSEMDIAG N setenv CTM_DUSTEM_DIAG Y setenv CTM_DEPV_FILE Y setenv VDIFF_DIAG_FILE Y setenv LTNGDIAG Y setenv B3GTS_DIAG Y setenv PT3DDIAG N setenv PT3DFRAC N setenv REP_LAYER_MIN -1 set DISP = delete setenv MPI_SM_POOL 16000 setenv MP_EAGER_LIMIT 65536 setenv MP_SINGLE_THREAD yes setenv MP_STDOUTMODE ordered setenv MP_LABELIO yes setenv MP_SHARED_MEMORY yes setenv MP_ADAPTER_USE shared setenv MP_CPU_USE multiple setenv MP_CSS_INTERRUPT yes set ICpath = /CAMData/CMAQ/2016_12US1/icbc set BCpath = /CAMData/CMAQ/2016_12US1/icbc set EMISpath = /CAMData/CMAQ/2016_12US1/emis/cmaq_ready set IN_PTpath = /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6 set IN_LTpath = /CAMData/CMAQ/2016_12US1/lightning set METpath = /CAMData/2016_EPA_Platform/met set OMIpath = /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc set NMLpath = /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc set NMLpath2 = /CAMData/CMAQ/2016_12US1/misc set LUpath = /CAMData/CMAQ/2016_12US1/surface set SZpath = /CAMData/CMAQ/2016_12US1/surface set ICBC_CASE = 2016ff_16j set EMIS_CASE = 2016ff_16j set TODAYG = 2016-06-01 set TODAYJ = `date -ud "${START_DATE}" +%Y%j` date -ud 2016-06-01 +%Y%j set STOP_DAY = `date -ud "${END_DATE}" +%Y%j` date -ud 2016-06-01 +%Y%j while ( 2016153 < = 2016153 ) set YYYYMMDD = `date -ud "${TODAYG}" +%Y%m%d` date -ud 2016-06-01 +%Y%m%d set YYMMDD = `date -ud "${TODAYG}" +%y%m%d` date -ud 2016-06-01 +%y%m%d set YYYYMM = `date -ud "${TODAYG}" +%Y%m` date -ud 2016-06-01 +%Y%m set YYYY = `date -ud "${TODAYG}" +%Y` date -ud 2016-06-01 +%Y set YYYYJJJ = 2016153 set YESTERDAY = `date -ud "${TODAYG}-1days" +%Y%m%d` date -ud 2016-06-01-1days +%Y%m%d if ( TRUE == true || TRUE == TRUE ) then setenv ICFILE ICON_cb6r3_ae6_profile_12US1_timeind setenv INIT_MEDC_1 notused setenv INITIAL_RUN Y rm -rf /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS/CTM_LOG_000.v531_gcc_2016_CONUS_20160601 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS/CTM_LOG_001.v531_gcc_2016_CONUS_20160601 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS/CTM_LOG_002.v531_gcc_2016_CONUS_20160601 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS/CTM_LOG_003.v531_gcc_2016_CONUS_20160601 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS/CTM_LOG_004.v531_gcc_2016_CONUS_20160601 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS/CTM_LOG_005.v531_gcc_2016_CONUS_20160601 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS/CTM_LOG_006.v531_gcc_2016_CONUS_20160601 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS/CTM_LOG_007.v531_gcc_2016_CONUS_20160601 mkdir -p /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS else set BCFILE = bctr_12km_HCMAQ_V53BETA2_M3DRY_cb6r3m_ae7_kmtbr_BCON_V53_201606.ncf set OMIfile = OMI_1979_to_2017.dat set OPTfile = PHOT_OPTICS.dat setenv GRID_BDY_2D /CAMData/2016_EPA_Platform/met/GRIDBDY2D.12US1.35L.160601 setenv GRID_CRO_2D /CAMData/2016_EPA_Platform/met/GRIDCRO2D.12US1.35L.160601 setenv GRID_CRO_3D /CAMData/2016_EPA_Platform/met/GRIDCRO3D.12US1.35L.160601 setenv GRID_CRO_3D setenv GRID_DOT_2D /CAMData/2016_EPA_Platform/met/GRIDDOT2D.12US1.35L.160601 setenv MET_CRO_2D /CAMData/2016_EPA_Platform/met/METCRO2D.12US1.35L.160601 setenv MET_CRO_3D /CAMData/2016_EPA_Platform/met/METCRO3D.12US1.35L.160601 setenv MET_DOT_3D /CAMData/2016_EPA_Platform/met/METDOT3D.12US1.35L.160601 setenv MET_BDY_3D /CAMData/2016_EPA_Platform/met/METBDY3D.12US1.35L.160601 setenv EMISSCTRL_NML /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/EmissCtrl_cb6r3_ae7_aq.nml setenv CMAQ_MASKS /CAMData/CMAQ/2016_12US1/surface/12US1_surf.ncf set EMDATES = /CAMData/CMAQ/2016_12US1/emis/emis_dates/smk_merge_dates_201606.txt set intable = `grep "^${YYYYMMDD}" $EMDATES` grep ^20160601 /CAMData/CMAQ/2016_12US1/emis/emis_dates/smk_merge_dates_201606.txt set Date = `echo $intable[1] | cut -d, -f1` cut -d, -f1 echo 20160601, set aveday_N = `echo $intable[2] | cut -d, -f1` cut -d, -f1 echo 20160607, set aveday_Y = `echo $intable[3] | cut -d, -f1` cut -d, -f1 echo 20160607, set mwdss_N = `echo $intable[4] | cut -d, -f1` cut -d, -f1 echo 20160607, set mwdss_Y = `echo $intable[5] | cut -d, -f1` cut -d, -f1 echo 20160607, set week_N = `echo $intable[6] | cut -d, -f1` cut -d, -f1 echo 20160608, set week_Y = `echo $intable[7] | cut -d, -f1` cut -d, -f1 echo 20160608, set all = `echo $intable[8] | cut -d, -f1` cut -d, -f1 echo 20160601 setenv N_EMIS_GR 1 set EMISfile = emis_mole_all_20160601_12US1_nobeis_2016ff_16j.ncf setenv GR_EMIS_001 /CAMData/CMAQ/2016_12US1/emis/cmaq_ready/emis_mole_all_20160601_12US1_nobeis_2016ff_16j.ncf setenv GR_EMIS_LAB_001 GRIDDED_EMIS setenv GR_EM_DTOVRD_001 F setenv N_EMIS_PT 8 set STKCASEE = 12US1_cmaq_cb6_2016ff_16j set STKCASEG = 12US1_2016ff_16j setenv STK_GRPS_001 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptnonipm/stack_groups_ptnonipm_12US1_2016ff_16j.ncf setenv STK_GRPS_002 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptegu/stack_groups_ptegu_12US1_2016ff_16j.ncf setenv STK_GRPS_003 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/othpt/stack_groups_othpt_12US1_2016ff_16j.ncf setenv STK_GRPS_004 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptagfire/stack_groups_ptagfire_20160601_12US1_2016ff_16j.ncf setenv STK_GRPS_005 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptfire/stack_groups_ptfire_20160601_12US1_2016ff_16j.ncf setenv STK_GRPS_006 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptfire_othna/stack_groups_ptfire_othna_20160601_12US1_2016ff_16j.ncf setenv STK_GRPS_007 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/pt_oilgas/stack_groups_pt_oilgas_12US1_2016ff_16j.ncf setenv STK_GRPS_008 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/cmv_c3/stack_groups_cmv_c3_12US1_2016ff_16j.ncf setenv LAYP_STTIME 000000 setenv LAYP_NSTEPS 240000 setenv STK_EMIS_001 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptnonipm/inln_mole_ptnonipm_20160607_12US1_cmaq_cb6_2016ff_16j.ncf setenv STK_EMIS_002 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptegu/inln_mole_ptegu_20160601_12US1_cmaq_cb6_2016ff_16j.ncf setenv STK_EMIS_003 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/othpt/inln_mole_othpt_20160607_12US1_cmaq_cb6_2016ff_16j.ncf setenv STK_EMIS_004 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptagfire/inln_mole_ptagfire_20160601_12US1_cmaq_cb6_2016ff_16j.ncf setenv STK_EMIS_005 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptfire/inln_mole_ptfire_20160601_12US1_cmaq_cb6_2016ff_16j.ncf setenv STK_EMIS_006 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/ptfire_othna/inln_mole_ptfire_othna_20160601_12US1_cmaq_cb6_2016ff_16j.ncf setenv STK_EMIS_007 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/pt_oilgas/inln_mole_pt_oilgas_20160607_12US1_cmaq_cb6_2016ff_16j.ncf setenv STK_EMIS_008 /CAMData/2016_EPA_Platform/2016beta/2016ff_16j/smoke_out/2016ff_16j/12US1/cmaq_cb6/cmv_c3/inln_mole_cmv_c3_20160607_12US1_cmaq_cb6_2016ff_16j.ncf setenv LAYP_STDATE 2016153 setenv STK_EMIS_LAB_001 POINT_NONEGU setenv STK_EMIS_LAB_002 POINT_EGU setenv STK_EMIS_LAB_003 POINT_OTHER setenv STK_EMIS_LAB_004 POINT_AGFIRES setenv STK_EMIS_LAB_005 POINT_FIRES setenv STK_EMIS_LAB_006 POINT_OTHFIRES setenv STK_EMIS_LAB_007 POINT_OILGAS setenv STK_EMIS_LAB_008 POINT_CMV setenv STK_EM_SYM_DATE_001 T setenv STK_EM_SYM_DATE_002 T setenv STK_EM_SYM_DATE_003 T setenv STK_EM_SYM_DATE_004 T setenv STK_EM_SYM_DATE_005 T setenv STK_EM_SYM_DATE_006 T setenv STK_EM_SYM_DATE_007 T setenv STK_EM_SYM_DATE_008 T if ( N == Y ) then if ( Y == Y ) then set IN_BEISpath = /CAMData/CMAQ/2016_12US1/surface set GSPROpath = /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc setenv BIOG_SPRO B10C6 setenv GSPRO /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/gspro_biogenics.txt setenv B3GRD /CAMData/CMAQ/2016_12US1/surface/b3grd.smoke30_beis361.12US1.2011NLCD_FIA5.1_CDL_norm_v3.ncf setenv BIOSW_YN Y setenv BIOSEASON /CAMData/CMAQ/2016_12US1/surface/bioseason.cmaq.2016j_12US1.ncf_full setenv SUMMER_YN Y setenv PX_VERSION Y setenv SOILINP /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SOILOUT_v531_gcc_2016_CONUS_20160531.nc endif if ( N == Y ) then setenv OCEAN_1 /CAMData/CMAQ/2016_12US1/surface/12US1_surf.ncf if ( N == Y ) then setenv CTM_APPL v531_gcc_2016_CONUS_20160601 setenv S_CGRID /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CGRID_v531_gcc_2016_CONUS_20160601.nc setenv CTM_CONC_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CONC_v531_gcc_2016_CONUS_20160601.nc -v setenv A_CONC_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_ACONC_v531_gcc_2016_CONUS_20160601.nc -v setenv MEDIA_CONC /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_MEDIA_CONC_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_DRY_DEP_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DRYDEP_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_DEPV_DIAG /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPV_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_PT3D_DIAG /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PT3D_v531_gcc_2016_CONUS_20160601.nc -v setenv B3GTS_S /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_B3GTS_S_v531_gcc_2016_CONUS_20160601.nc -v setenv SOILOUT /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SOILOUT_v531_gcc_2016_CONUS_20160601.nc setenv CTM_WET_DEP_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP1_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_WET_DEP_2 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP2_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_PMDIAG_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PMDIAG_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_APMDIAG_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_APMDIAG_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_RJ_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG1_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_RJ_2 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG2_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_RJ_3 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG3_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_SSEMIS_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SSEMIS_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_DUST_EMIS_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DUSTEMIS_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_IPR_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_1_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_IPR_2 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_2_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_IPR_3 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_3_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_IRR_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_1_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_IRR_2 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_2_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_IRR_3 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_3_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_DRY_DEP_MOS /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDMOS_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_DRY_DEP_FST /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDFST_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_DEPV_MOS /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVFST_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_DEPV_FST /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVMOS_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_VDIFF_DIAG /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VDIFF_DIAG_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_VSED_DIAG /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VSED_DIAG_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_LTNGDIAG_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGHRLY_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_LTNGDIAG_2 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGCOL_v531_gcc_2016_CONUS_20160601.nc -v setenv CTM_VEXT_1 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VEXT_v531_gcc_2016_CONUS_20160601.nc -v setenv FLOOR_FILE /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/FLOOR_v531_gcc_2016_CONUS_20160601.txt if ( ! -d /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS ) mkdir -p /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS set log_test = `ls CTM_LOG_???.${CTM_APPL}` ls: No match. set OUT_FILES = ( /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/FLOOR_v531_gcc_2016_CONUS_20160601.txt /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CGRID_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CONC_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_ACONC_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_MEDIA_CONC_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DRYDEP_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPV_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PT3D_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_B3GTS_S_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SOILOUT_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP1_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP2_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PMDIAG_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_APMDIAG_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG1_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG2_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG3_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SSEMIS_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DUSTEMIS_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_1_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_2_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_3_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_1_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_2_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_3_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDMOS_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDFST_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVFST_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVMOS_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VDIFF_DIAG_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VSED_DIAG_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGHRLY_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGCOL_v531_gcc_2016_CONUS_20160601.nc -v ) set OUT_FILES = `echo $OUT_FILES | sed "s; -v;;g" ` sed s; -v;;g echo /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/FLOOR_v531_gcc_2016_CONUS_20160601.txt /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CGRID_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CONC_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_ACONC_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_MEDIA_CONC_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DRYDEP_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPV_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PT3D_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_B3GTS_S_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SOILOUT_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP1_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP2_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PMDIAG_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_APMDIAG_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG1_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG2_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG3_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SSEMIS_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DUSTEMIS_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_1_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_2_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_3_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_1_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_2_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_3_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDMOS_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDFST_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVFST_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVMOS_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VDIFF_DIAG_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VSED_DIAG_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGHRLY_v531_gcc_2016_CONUS_20160601.nc -v /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGCOL_v531_gcc_2016_CONUS_20160601.nc -v set out_test = `ls $OUT_FILES` ls /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/FLOOR_v531_gcc_2016_CONUS_20160601.txt /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CGRID_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CONC_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_ACONC_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_MEDIA_CONC_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DRYDEP_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPV_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PT3D_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_B3GTS_S_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SOILOUT_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP1_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP2_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PMDIAG_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_APMDIAG_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG1_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG2_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG3_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SSEMIS_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DUSTEMIS_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_1_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_2_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_3_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_1_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_2_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_3_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDMOS_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDFST_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVFST_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVMOS_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VDIFF_DIAG_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VSED_DIAG_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGHRLY_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGCOL_v531_gcc_2016_CONUS_20160601.nc ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/FLOOR_v531_gcc_2016_CONUS_20160601.txt: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CGRID_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_MEDIA_CONC_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PT3D_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SOILOUT_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PMDIAG_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_APMDIAG_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_SSEMIS_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DUSTEMIS_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_1_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_2_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PA_3_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_1_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_2_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_IRR_3_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDMOS_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DDFST_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVFST_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPVMOS_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VDIFF_DIAG_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_VSED_DIAG_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGHRLY_v531_gcc_2016_CONUS_20160601.nc: No such file or directory ls: cannot access /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_LTNGCOL_v531_gcc_2016_CONUS_20160601.nc: No such file or directory if ( delete == delete ) then echo ancillary log files being deleted ancillary log files being deleted foreach file ( ) echo output files being deleted output files being deleted foreach file ( /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_ACONC_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_B3GTS_S_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CONC_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPV_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DRYDEP_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG1_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG2_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG3_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP1_v531_gcc_2016_CONUS_20160601.nc /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP2_v531_gcc_2016_CONUS_20160601.nc ) echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_ACONC_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_ACONC_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_ACONC_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_B3GTS_S_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_B3GTS_S_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_B3GTS_S_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CONC_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CONC_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_CONC_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPV_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPV_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DEPV_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DRYDEP_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DRYDEP_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_DRYDEP_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG1_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG1_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG1_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG2_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG2_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG2_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG3_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG3_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_PHOTDIAG3_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP1_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP1_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP1_v531_gcc_2016_CONUS_20160601.nc end echo deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP2_v531_gcc_2016_CONUS_20160601.nc deleting /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP2_v531_gcc_2016_CONUS_20160601.nc /bin/rm -f /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/CCTM_WETDEP2_v531_gcc_2016_CONUS_20160601.nc end /bin/rm: No match. else setenv CTM_STDATE 2016153 setenv CTM_STTIME 000000 setenv CTM_RUNLEN 240000 setenv CTM_TSTEP 010000 setenv INIT_CONC_1 /CAMData/CMAQ/2016_12US1/icbc/ICON_cb6r3_ae6_profile_12US1_timeind setenv INIT_GASC_1 /CAMData/CMAQ/2016_12US1/icbc/ICON_cb6r3_ae6_profile_12US1_timeind setenv INIT_AERO_1 /CAMData/CMAQ/2016_12US1/icbc/ICON_cb6r3_ae6_profile_12US1_timeind setenv INIT_NONR_1 /CAMData/CMAQ/2016_12US1/icbc/ICON_cb6r3_ae6_profile_12US1_timeind setenv INIT_TRAC_1 /CAMData/CMAQ/2016_12US1/icbc/ICON_cb6r3_ae6_profile_12US1_timeind setenv BNDY_CONC_1 /CAMData/CMAQ/2016_12US1/icbc/bctr_12km_HCMAQ_V53BETA2_M3DRY_cb6r3m_ae7_kmtbr_BCON_V53_201606.ncf setenv BNDY_GASC_1 /CAMData/CMAQ/2016_12US1/icbc/bctr_12km_HCMAQ_V53BETA2_M3DRY_cb6r3m_ae7_kmtbr_BCON_V53_201606.ncf setenv BNDY_AERO_1 /CAMData/CMAQ/2016_12US1/icbc/bctr_12km_HCMAQ_V53BETA2_M3DRY_cb6r3m_ae7_kmtbr_BCON_V53_201606.ncf setenv BNDY_NONR_1 /CAMData/CMAQ/2016_12US1/icbc/bctr_12km_HCMAQ_V53BETA2_M3DRY_cb6r3m_ae7_kmtbr_BCON_V53_201606.ncf setenv BNDY_TRAC_1 /CAMData/CMAQ/2016_12US1/icbc/bctr_12km_HCMAQ_V53BETA2_M3DRY_cb6r3m_ae7_kmtbr_BCON_V53_201606.ncf setenv OMI /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/OMI_1979_to_2017.dat setenv OPTICS_DATA /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/PHOT_OPTICS.dat set TR_DVpath = /CAMData/2016_EPA_Platform/met set TR_DVfile = /CAMData/2016_EPA_Platform/met/METCRO2D.12US1.35L.160601 setenv gc_matrix_nml /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/GC_cb6r3_ae7_aq.nml setenv ae_matrix_nml /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/AE_cb6r3_ae7_aq.nml setenv nr_matrix_nml /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/NR_cb6r3_ae7_aq.nml setenv tr_matrix_nml /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/Species_Table_TR_0.nml setenv CSQY_DATA /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/CSQY_DATA_cb6r3_ae7_aq if ( ! ( -e /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/CSQY_DATA_cb6r3_ae7_aq ) ) then if ( ! ( -e /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/PHOT_OPTICS.dat ) ) then ls -l /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/CCTM_v531.exe -rwxrwxr-x. 1 ec2-user ec2-user 24619824 Apr 28 18:23 /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/CCTM_v531.exe size /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/CCTM_v531.exe text data bss dec hex filename 7996613 15395976 280804360 304196949 1221ad55 /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/CCTM_v531.exe unlimit limit cputime unlimited filesize unlimited datasize unlimited stacksize unlimited coredumpsize unlimited memoryuse unlimited vmemoryuse unlimited descriptors 4096 memorylocked 64 kbytes maxproc 280198 maxlocks unlimited maxsignal 280198 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited set MPI = /CAMData/CMAQ/Libraries/openmpi-4.0.3/bin set MPIRUN = /CAMData/CMAQ/Libraries/openmpi-4.0.3/bin/mpirun /usr/bin/time mpirun -np 8 /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/CCTM_v531.exe CTM_APPL | v531_gcc_2016_CONUS_20160601 ================================================================================ | | | The Community Multiscale Air Quality (CMAQ) Model | | Version 5.3.1 | | | | Built and Maintained by the | | Office of Research and Development | | United States Environmental Protection Agency | | | | https://www.epa.gov/cmaq | | | | Source Code: https://www.github.com/USEPA/cmaq/tree/master | | Documentation: https://www.github.com/USEPA/cmaq/tree/master/DOCS | | | | The CMAQ Model is tested and released with cooperation from | | the Community Modeling and Analysis System (CMAS) Center via | | contract support. CMAS is managed by the Institute for the | | Environment, University of North Carolina at Chapel Hill. | | CMAS URL: (https://www.cmascenter.org) | | | ================================================================================ This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2019 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 136 2019-10-16 13:57:49Z coats $ netCDF version 4.1.3 of Nov 20 2019 16:01:30 $ =========================================== |>--- ENVIRONMENT VARIABLE REPORT ---<| =========================================== |> Grid and High-Level Model Parameters: +========================================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- BLD | (default) OUTDIR | /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS NEW_START | T ISAM_NEW_START | Y (default) GRID_NAME | 12US1 CTM_TSTEP | 10000 CTM_RUNLEN | 240000 CTM_PROGNAME | DRIVER (default) CTM_STDATE | 2016153 CTM_STTIME | 0 NPCOL_NPROW | 4 2 CTM_MAXSYNC | 300 CTM_MINSYNC | 60 |> Multiprocess control, output and error checking: +==================================================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- PRINT_PROC_TIME | T FL_ERR_STOP | F CTM_CKSUM | T AVG_FILE_ENDTIME | F AVG_CONC_SPCS | ALL CONC_SPCS | (default) ACONC_BLEV_ELEV | 1 1 CONC_BLEV_ELEV | (default) IOAPI_LOG_WRITE | F VERTEXT | F (default) VERTEXT_COORD_PA | (default) gc_matrix_nml | /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/GC_cb6r3_ae7_aq.nml ae_matrix_nml | /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/AE_cb6r3_ae7_aq.nml nr_matrix_nml | /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/NR_cb6r3_ae7_aq.nml tr_matrix_nml | /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/Species_Table_TR_0.nml |> Chemistry and Photolysis: +============================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_PHOTDIAG | T NLAYS_PHOTDIAG | 3 NWAVE_PHOTDIAG | (default) CORE_SHELL_OPTIC | F (default) OPTICS_MIE_CALC | F (default) GEAR_ATOL | 0.100E-08 (default) GEAR_RTOL | 0.100E-02 (default) RB_RTOL | 0.100E-02 (default) RB_ATOL | 0.100E-06 (default) |> Aerosols: +============= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_AVISDIAG | F (default) CTM_ZERO_PCSOA | F CTM_AOD | F (default) CTM_PMDIAG | F CTM_APMDIAG | T APMDIAG_BLEV_ELE | (default) AVG_PMDIAG_SPCS | (default) STM_SO4TRACK | F (default) |> Cloud Processes: +==================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CLD_DIAG | T |> Air-Surface Exchange Processes: +=================================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- PX_VERSION | T CTM_ABFLUX | F CTM_MOSAIC | F CTM_SFC_HONO | T CLM_VERSION | F NOAH_VERSION | F CTM_STAGE | F (default) CTM_DEPV_FILE | T CTM_HGBIDI | F CTM_BIDI_FERT_NH | T (default) CTM_WBDUST_BELD | BELD3 |> Transport Processes: +======================== --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_VDIFF_DIAG_F | F (default) SIGMA_SYNC_TOP | 0.700E+00 ADV_HDIV_LIM | 0.900E+00 (default) CTM_ADV_CFL | 0.950E+00 KZMIN | T CTM_WVEL | T CTM_GRAV_SETL | T |> Emissions Parameters: +========================= --Env Variable-- | --Value-- -------------------------------------------------------------------------------- EMISSCTRL_NML | /CAMData/CMAQ/2016_12US1/CMAQ-master/CCTM/scripts/BLD_CCTM_v531_gcc/EmissCtrl_cb6r3_ae7_aq.nml CTM_EMLAYS | 0 (default) N_EMIS_GR | 1 N_EMIS_TR | 0 (default) CTM_EMISCHK | F CTM_BIOGEMIS | T BIOG_SPRO | B10C6 BIOSW_YN | T B3GTS_DIAG | T CTM_MGEMDIAG | F (default) CTM_OCEAN_CHEM | T (default) CTM_WB_DUST | F CTM_DUSTEM_DIAG | T CTM_SSEMDIAG | F CTM_LTNG_NO | F LTNG_ASSIM_DT | 0 (default) LTNGNO | InLine (default) USE_NLDN | F (default) LTNGDIAG | T MOLSNCG | 0.350E+03 (default) MOLSNIC | 0.350E+03 (default) N_EMIS_PT | 8 IPVERT | 0 (default) EMISDIAG | F EMIS_SYM_DATE | F (default) |> Process Analysis Parameters: +================================ --Env Variable-- | --Value-- -------------------------------------------------------------------------------- CTM_PROCAN | F PA_BCOL_ECOL | 10 320 PA_BROW_EROW | 10 195 PA_BLEV_ELEV | 1 4 MET data determined based on WRF ARM version 3.8 -=- MPP Processor-to-Subdomain Map -=- Number of Processors = 8 ____________________________________________________ | | | PE #Cols Col_Range #Rows Row_Range | |__________________________________________________| | | | 0 115 1: 115 150 1: 150 | | 1 115 116: 230 150 1: 150 | | 2 115 231: 345 150 1: 150 | | 3 114 346: 459 150 1: 150 | | 4 115 1: 115 149 151: 299 | | 5 115 116: 230 149 151: 299 | | 6 115 231: 345 149 151: 299 | | 7 114 346: 459 149 151: 299 | |__________________________________________________| ================================ |>--- TIME INTEGRATION ---<| ================================ Processing Day/Time [YYYYDDD:HHMMSS]: 2016153:000000 Which is Equivalent to (UTC): 0:00:00 Wednesday, June 1, 2016 Time-Step Length (HHMMSS): 000500 VDIFF completed... 43.7 seconds COUPLE completed... 0.4 seconds HADV completed... 20.0 seconds ZADV completed... 5.5 seconds HDIFF completed... 9.8 seconds DECOUPLE completed... 0.4 seconds PHOT completed... 9.7 seconds CLDPROC completed... 2.9 seconds -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- mpirun noticed that process rank 7 with PID 0 on node ip-10-21-154-88 exited on signal 9 (Killed). -------------------------------------------------------------------------- 155.80user 3.99system 2:52.74elapsed 92%CPU (0avgtext+0avgdata 10841380maxresident)k 455018inputs+16968outputs (590major+901980minor)pagefaults 0swaps date Wed Apr 29 15:04:19 UTC 2020 if ( ! -e /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS ) then mv CTM_LOG_000.v531_gcc_2016_CONUS_20160601 CTM_LOG_001.v531_gcc_2016_CONUS_20160601 CTM_LOG_002.v531_gcc_2016_CONUS_20160601 CTM_LOG_003.v531_gcc_2016_CONUS_20160601 CTM_LOG_004.v531_gcc_2016_CONUS_20160601 CTM_LOG_005.v531_gcc_2016_CONUS_20160601 CTM_LOG_006.v531_gcc_2016_CONUS_20160601 CTM_LOG_007.v531_gcc_2016_CONUS_20160601 /CAMData/CMAQ/2016_12US1/output_CCTM_v531_gcc_2016_CONUS/LOGS setenv NEW_START false set TODAYG = `date -ud "${TODAYG}+1days" +%Y-%m-%d` date -ud 2016-06-01+1days +%Y-%m-%d set TODAYJ = `date -ud "${TODAYG}" +%Y%j` date -ud 2016-06-02 +%Y%j end while ( 2016154 < = 2016153 ) set RTMTOT = 0 foreach it ( `seq ${NDAYS}` ) NDAYS: Undefined variable. set RTMAVG = `echo "scale=2; ${RTMTOT} / ${NDAYS}" | bc -l` NDAYS: Undefined variable. set RTMTOT = `echo "scale=2; ${RTMTOT} / 1" | bc -l` bc -l echo scale=2; 0 / 1 /CAMData/anaconda2/bin/python/bc: Not a directory. echo echo ================================== ================================== echo ***** CMAQ TIMING REPORT ***** ***** CMAQ TIMING REPORT ***** echo ================================== ================================== echo Start Day: 2016-06-01 Start Day: 2016-06-01 echo End Day: 2016-06-01 End Day: 2016-06-01 NDAYS: Undefined variable.