[scies_jrsun_2@lon26%tianhe2-H ioapi-3.2-large]$ ls exclude install ioapi Linux2_x86_64ifort m3tools Makefile Makefile.template make.log tests VERSION.txt [scies_jrsun_2@lon26%tianhe2-H ioapi-3.2-large]$ make configure Makefile:265: warning: overriding recipe for target `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort' Makefile:262: warning: ignoring old recipe for target `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort' (cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi ; sed -e 's|IOAPI_BASE|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large|' -e 's|LIBINSTALL|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort|' -e 's|BININSTALL|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort|' -e 's|IOAPI_DEFS|"-DIOAPI_NCF4"|' -e 's|NCFLIBS|-lnetcdff -lnetcdf|' -e 's|MAKEINCLUDE|include /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi/Makeinclude|' -e 's|PVMINCLUDE|include |' < Makefile.nocpl.sed > Makefile ) (cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/m3tools ; sed -e 's|IOAPI_BASE|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large|' -e 's|LIBINSTALL|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort|' -e 's|BININSTALL|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort|' -e 's|IOAPI_DEFS|"-DIOAPI_NCF4"|' -e 's|NCFLIBS|-lnetcdff -lnetcdf|' -e 's|MAKEINCLUDE|include /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi/Makeinclude|' -e 's|PVMINCLUDE|include |' < Makefile.nocpl.sed > Makefile ) [scies_jrsun_2@lon26%tianhe2-H ioapi-3.2-large]$ make Makefile:265: warning: overriding recipe for target `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort' Makefile:262: warning: ignoring old recipe for target `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort' (cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi ; make fixed_src) make[1]: Entering directory `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi' make[1]: Nothing to be done for `fixed_src'. make[1]: Leaving directory `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi' (cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi ; sed -e 's|IOAPI_BASE|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large|' -e 's|LIBINSTALL|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort|' -e 's|BININSTALL|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort|' -e 's|IOAPI_DEFS|"-DIOAPI_NCF4"|' -e 's|NCFLIBS|-lnetcdff -lnetcdf|' -e 's|MAKEINCLUDE|include /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi/Makeinclude|' -e 's|PVMINCLUDE|include |' < Makefile.nocpl.sed > Makefile ) (cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/m3tools ; sed -e 's|IOAPI_BASE|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large|' -e 's|LIBINSTALL|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort|' -e 's|BININSTALL|/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/install/Linux2_x86_64ifort|' -e 's|IOAPI_DEFS|"-DIOAPI_NCF4"|' -e 's|NCFLIBS|-lnetcdff -lnetcdf|' -e 's|MAKEINCLUDE|include /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi/Makeinclude|' -e 's|PVMINCLUDE|include |' < Makefile.nocpl.sed > Makefile ) (cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi ; make BIN=Linux2_x86_64ifort all) make[1]: Entering directory `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi' cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort; ar rsv libioapi.a m3utilio.o modgctp.o modwrfio.o modmpasfio.o modatts3.o modncfio.o modpdata.o r - m3utilio.o r - modgctp.o r - modwrfio.o r - modmpasfio.o r - modatts3.o r - modncfio.o r - modpdata.o cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort; ar rsv libioapi.a bilin.o bmatvec.o chkbuf3.o ckdesc3.o ckfile3.o ckgeom.o ckname.o crtbuf3.o currstep.o dble2real.o dbllist.o dmatvec.o dscgrid.o dt2str.o filchk3.o find1.o find2.o find3.o find4.o findc.o findr1.o findr2.o findr3.o findr4.o flush3.o gcd.o gctp.o getdble.o getmenu.o getnum.o getreal.o getstr.o getyn.o grdchk3.o gridops.o hhmmss.o index1.o initblk3.o intg2real.o intlist.o ioparms3.o lambert.o lblank.o len2.o ll2utm.o locat1.o locat2.o locat3.o locat4.o locatc.o locatr1.o locatr2.o locatr3.o locatr4.o lustr.o m3warn.o name2fid.o pcoef.o pgrdsum.o pmatvec.o poly.o promptdfile.o promptffile.o promptgrid.o promptmfile.o rdbndary.o rdbuf3.o rdcustom.o rdgrdded.o readsmet.o realist.o scanint.o setsphere.o sec2time.o str2dble.o skipl.o smatvec.o splitline.o str2int.o str2real.o strlist.o synchtao.o time2sec.o trimlen.o ungridb.o ungridi.o upcase.o utm2ll.o wrbndary.o wrbuf3.o wrcustom.o wrgrdded.o xtbuf3.o year4.o chkfil3.o cktflag3.o crdict3.o crtkf.o kfindx.o kfopen.o m3abort.o modgctp.o opnlist3.o rddict3.o rdiddata.o rdsmatrx.o runspec.o sync3.o wrdict3.o wriddata.o wrsmatrx.o xtract3.o r - bilin.o r - bmatvec.o r - chkbuf3.o r - ckdesc3.o r - ckfile3.o r - ckgeom.o r - ckname.o r - crtbuf3.o r - currstep.o r - dble2real.o r - dbllist.o r - dmatvec.o r - dscgrid.o r - dt2str.o r - filchk3.o r - find1.o r - find2.o r - find3.o r - find4.o r - findc.o r - findr1.o r - findr2.o r - findr3.o r - findr4.o r - flush3.o r - gcd.o r - gctp.o r - getdble.o r - getmenu.o r - getnum.o r - getreal.o r - getstr.o r - getyn.o r - grdchk3.o r - gridops.o r - hhmmss.o r - index1.o r - initblk3.o r - intg2real.o r - intlist.o r - ioparms3.o r - lambert.o r - lblank.o r - len2.o r - ll2utm.o r - locat1.o r - locat2.o r - locat3.o r - locat4.o r - locatc.o r - locatr1.o r - locatr2.o r - locatr3.o r - locatr4.o r - lustr.o r - m3warn.o r - name2fid.o r - pcoef.o r - pgrdsum.o r - pmatvec.o r - poly.o r - promptdfile.o r - promptffile.o r - promptgrid.o r - promptmfile.o r - rdbndary.o r - rdbuf3.o r - rdcustom.o r - rdgrdded.o r - readsmet.o r - realist.o r - scanint.o r - setsphere.o r - sec2time.o r - str2dble.o r - skipl.o r - smatvec.o r - splitline.o r - str2int.o r - str2real.o r - strlist.o r - synchtao.o r - time2sec.o r - trimlen.o r - ungridb.o r - ungridi.o r - upcase.o r - utm2ll.o r - wrbndary.o r - wrbuf3.o r - wrcustom.o r - wrgrdded.o r - xtbuf3.o r - year4.o r - chkfil3.o r - cktflag3.o r - crdict3.o r - crtkf.o r - kfindx.o r - kfopen.o r - m3abort.o r - modgctp.o r - opnlist3.o r - rddict3.o r - rdiddata.o r - rdsmatrx.o r - runspec.o r - sync3.o r - wrdict3.o r - wriddata.o r - wrsmatrx.o r - xtract3.o cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort; ar rsv libioapi.a cbarnes1.o cbarnesN.o check3.o crlf.o currec.o daymon.o ddtvar3.o ddtvar3v.o getdate.o getdfile.o getefile.o getffile.o initlog3.o interp3.o isdstime.o jstep3.o julian.o junit.o m3err.o m3exit.o m3msg2.o mmddyy.o nextime.o read3.o read4d.o secsdiff.o wkday.o write3.o write4d.o yr2day.o close3.o crtfil3.o desc3.o init3.o inqatt3.o kfread.o kfwrite.o open3.o opnfil3.o opnkf.o opnlog3.o pn_crtfil3.o pn_opnfil3.o pn_wrvars.o rdatt3.o rdgrnest.o rdprofil.o rdtflag.o rdvars.o shut3.o syncfid.o wratt3.o wrgrnest.o wrmpigrd.o wrpatch.o wrprofil.o wrtflag.o wrvars.o r - cbarnes1.o r - cbarnesN.o r - check3.o r - crlf.o r - currec.o r - daymon.o r - ddtvar3.o r - ddtvar3v.o r - getdate.o r - getdfile.o r - getefile.o r - getffile.o r - initlog3.o r - interp3.o r - isdstime.o r - jstep3.o r - julian.o r - junit.o r - m3err.o r - m3exit.o r - m3msg2.o r - mmddyy.o r - nextime.o r - read3.o r - read4d.o r - secsdiff.o r - wkday.o r - write3.o r - write4d.o r - yr2day.o r - close3.o r - crtfil3.o r - desc3.o r - init3.o r - inqatt3.o r - kfread.o r - kfwrite.o r - open3.o r - opnfil3.o r - opnkf.o r - opnlog3.o r - pn_crtfil3.o r - pn_opnfil3.o r - pn_wrvars.o r - rdatt3.o r - rdgrnest.o r - rdprofil.o r - rdtflag.o r - rdvars.o r - shut3.o r - syncfid.o r - wratt3.o r - wrgrnest.o r - wrmpigrd.o r - wrpatch.o r - wrprofil.o r - wrtflag.o r - wrvars.o cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort; ar rsv libioapi.a bufint3.o check3c.o close3c.o currstepc.o daymonc.o ddtvar3c.o desc3c.o dscgridc.o dt2strc.o envgets.o filchk3c.o findsc.o get_endian.o getdfilec.o getdttime.o getefilec.o hhmmssc.o init3c.o inqatt3c.o interp3c.o iobin3.o julianc.o locatsc.o m3errc.o m3exitc.o m3mesgc.o m3warnc.o mmddyyc.o nameval.o nextimec.o open3c.o rdatt3c.o read3c.o read4dc.o rmfile.o sec2timec.o secsdiffc.o shut3c.o sleep3.o sortic.o sortir.o sortis.o sync3c.o systemf.o time2secc.o wkdayc.o wratt3c.o write3c.o write4dc.o xtract3c.o iocpl.o iocplf2c.o r - bufint3.o r - check3c.o r - close3c.o r - currstepc.o r - daymonc.o r - ddtvar3c.o r - desc3c.o r - dscgridc.o r - dt2strc.o r - envgets.o r - filchk3c.o r - findsc.o r - get_endian.o r - getdfilec.o r - getdttime.o r - getefilec.o r - hhmmssc.o r - init3c.o r - inqatt3c.o r - interp3c.o r - iobin3.o r - julianc.o r - locatsc.o r - m3errc.o r - m3exitc.o r - m3mesgc.o r - m3warnc.o r - mmddyyc.o r - nameval.o r - nextimec.o r - open3c.o r - rdatt3c.o r - read3c.o r - read4dc.o r - rmfile.o r - sec2timec.o r - secsdiffc.o r - shut3c.o r - sleep3.o r - sortic.o r - sortir.o r - sortis.o r - sync3c.o r - systemf.o r - time2secc.o r - wkdayc.o r - wratt3c.o r - write3c.o r - write4dc.o r - xtract3c.o r - iocpl.o r - iocplf2c.o make[1]: Leaving directory `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/ioapi' (cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/m3tools ; make BIN=Linux2_x86_64ifort all) make[1]: Entering directory `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/m3tools' cd /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort; ifort -auto -warn notruncated_source -Bstatic -static-intel /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/airs2m3.o -L/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort -lioapi -lnetcdff -lnetcdf -qopenmp -Bstatic -o airs2m3 /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(libdispatch_la-dfile.o): In function `NC_open': dfile.c:(.text+0x754): undefined reference to `MPI_File_open' dfile.c:(.text+0x76e): undefined reference to `MPI_File_get_size' dfile.c:(.text+0x883): undefined reference to `MPI_File_read_at_all' dfile.c:(.text+0xb08): undefined reference to `MPI_File_read_at_all' dfile.c:(.text+0xd2a): undefined reference to `MPI_File_close' dfile.c:(.text+0xf16): undefined reference to `MPI_Error_class' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5var.o): In function `nc4_reopen_dataset': hdf5var.c:(.text+0x33): undefined reference to `H5open' hdf5var.c:(.text+0x3a): undefined reference to `H5P_CLS_DATASET_ACCESS_ID_g' hdf5var.c:(.text+0x41): undefined reference to `H5Pcreate' hdf5var.c:(.text+0x6c): undefined reference to `H5Pset_chunk_cache' hdf5var.c:(.text+0x79): undefined reference to `H5Dclose' hdf5var.c:(.text+0x8c): undefined reference to `H5Dopen2' hdf5var.c:(.text+0x9c): undefined reference to `H5Pclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5var.o): In function `NC4_def_var': hdf5var.c:(.text+0x406): undefined reference to `H5Tget_native_type' hdf5var.c:(.text+0x473): undefined reference to `H5Tget_class' hdf5var.c:(.text+0x6c6): undefined reference to `H5Dclose' hdf5var.c:(.text+0x6e8): undefined reference to `H5Gunlink' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5var.o): In function `NC4_rename_var': hdf5var.c:(.text+0x2242): undefined reference to `H5Gmove' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5var.o): In function `NC4_put_vars': hdf5var.c:(.text+0x263d): undefined reference to `H5Dget_space' hdf5var.c:(.text+0x2695): undefined reference to `H5Sget_simple_extent_dims' hdf5var.c:(.text+0x2746): undefined reference to `H5Sget_simple_extent_type' hdf5var.c:(.text+0x2755): undefined reference to `H5Screate' hdf5var.c:(.text+0x2951): undefined reference to `H5open' hdf5var.c:(.text+0x2958): undefined reference to `H5P_CLS_DATASET_XFER_ID_g' hdf5var.c:(.text+0x295f): undefined reference to `H5Pcreate' hdf5var.c:(.text+0x299c): undefined reference to `H5Sselect_hyperslab' hdf5var.c:(.text+0x29ba): undefined reference to `H5Sclose' hdf5var.c:(.text+0x29cf): undefined reference to `H5Sclose' hdf5var.c:(.text+0x29e6): undefined reference to `H5Pclose' hdf5var.c:(.text+0x2aae): undefined reference to `H5Pset_dxpl_mpio' hdf5var.c:(.text+0x2b0a): undefined reference to `H5Dwrite' hdf5var.c:(.text+0x2c1d): undefined reference to `H5Dset_extent' hdf5var.c:(.text+0x2c32): undefined reference to `H5Sclose' hdf5var.c:(.text+0x2c4e): undefined reference to `H5Dget_space' hdf5var.c:(.text+0x2d95): undefined reference to `MPI_Allreduce' hdf5var.c:(.text+0x2ddc): undefined reference to `H5Sselect_hyperslab' hdf5var.c:(.text+0x2e13): undefined reference to `MPI_Allreduce' hdf5var.c:(.text+0x2e74): undefined reference to `H5Screate_simple' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5var.o): In function `NC4_get_vars': hdf5var.c:(.text+0x3126): undefined reference to `H5Dget_space' hdf5var.c:(.text+0x3207): undefined reference to `H5Sget_simple_extent_dims' hdf5var.c:(.text+0x3885): undefined reference to `H5Sget_simple_extent_type' hdf5var.c:(.text+0x3894): undefined reference to `H5Screate' hdf5var.c:(.text+0x3a1a): undefined reference to `H5open' hdf5var.c:(.text+0x3a21): undefined reference to `H5P_CLS_DATASET_XFER_ID_g' hdf5var.c:(.text+0x3a28): undefined reference to `H5Pcreate' hdf5var.c:(.text+0x3a74): undefined reference to `H5Sselect_hyperslab' hdf5var.c:(.text+0x3a98): undefined reference to `H5Sclose' hdf5var.c:(.text+0x3ac6): undefined reference to `H5Sclose' hdf5var.c:(.text+0x3af4): undefined reference to `H5Pclose' hdf5var.c:(.text+0x3bb9): undefined reference to `H5open' hdf5var.c:(.text+0x3bc0): undefined reference to `H5P_CLS_DATASET_XFER_ID_g' hdf5var.c:(.text+0x3bc7): undefined reference to `H5Pcreate' hdf5var.c:(.text+0x3c20): undefined reference to `H5Pset_dxpl_mpio' hdf5var.c:(.text+0x3c37): undefined reference to `H5Sselect_none' hdf5var.c:(.text+0x3c82): undefined reference to `H5Dget_space' hdf5var.c:(.text+0x3c9e): undefined reference to `H5Sselect_none' hdf5var.c:(.text+0x3cd3): undefined reference to `H5Dread' hdf5var.c:(.text+0x3d1e): undefined reference to `H5Pset_dxpl_mpio' hdf5var.c:(.text+0x3d5d): undefined reference to `H5Dread' hdf5var.c:(.text+0x3e55): undefined reference to `H5Tget_size' hdf5var.c:(.text+0x3e7c): undefined reference to `H5Tis_variable_str' hdf5var.c:(.text+0x3e94): undefined reference to `H5Tget_size' hdf5var.c:(.text+0x3ee9): undefined reference to `H5Screate_simple' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `put_att_grpa': nc4hdf.c:(.text+0x68): undefined reference to `H5Sclose' nc4hdf.c:(.text+0xf7): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x10d): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x125): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x13d): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x157): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x1ba): undefined reference to `H5Screate' nc4hdf.c:(.text+0x1ed): undefined reference to `H5Screate_simple' nc4hdf.c:(.text+0x21f): undefined reference to `H5Screate' nc4hdf.c:(.text+0x23c): undefined reference to `H5Tset_size' nc4hdf.c:(.text+0x255): undefined reference to `H5Tset_strpad' nc4hdf.c:(.text+0x274): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x2a2): undefined reference to `H5Aopen' nc4hdf.c:(.text+0x2d4): undefined reference to `H5Acreate1' nc4hdf.c:(.text+0x2fa): undefined reference to `H5Aget_type' nc4hdf.c:(.text+0x318): undefined reference to `H5Aget_space' nc4hdf.c:(.text+0x336): undefined reference to `H5Sget_simple_extent_npoints' nc4hdf.c:(.text+0x373): undefined reference to `H5Adelete' nc4hdf.c:(.text+0x39f): undefined reference to `H5Awrite' nc4hdf.c:(.text+0x3cb): undefined reference to `H5Screate' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `nc4_rec_write_metadata': nc4hdf.c:(.text+0x940): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x967): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x984): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x99c): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x9b7): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x9d8): undefined reference to `H5Sclose' nc4hdf.c:(.text+0xa5d): undefined reference to `H5Screate' nc4hdf.c:(.text+0xa9e): undefined reference to `H5Screate_simple' nc4hdf.c:(.text+0xae3): undefined reference to `H5Screate' nc4hdf.c:(.text+0xb13): undefined reference to `H5Tset_size' nc4hdf.c:(.text+0xb3a): undefined reference to `H5Tset_strpad' nc4hdf.c:(.text+0xb63): undefined reference to `H5Aexists' nc4hdf.c:(.text+0xb9b): undefined reference to `H5Aopen' nc4hdf.c:(.text+0xbd9): undefined reference to `H5Acreate1' nc4hdf.c:(.text+0xc0e): undefined reference to `H5Aget_type' nc4hdf.c:(.text+0xc31): undefined reference to `H5Aget_space' nc4hdf.c:(.text+0xc59): undefined reference to `H5Sget_simple_extent_npoints' nc4hdf.c:(.text+0xca3): undefined reference to `H5Adelete' nc4hdf.c:(.text+0xcdf): undefined reference to `H5Awrite' nc4hdf.c:(.text+0xd15): undefined reference to `H5Screate' nc4hdf.c:(.text+0xf88): undefined reference to `H5DSattach_scale' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `nc4_open_var_grp2': nc4hdf.c:(.text+0x10cf): undefined reference to `H5Dopen2' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `write_dim': nc4hdf.c:(.text+0x11a3): undefined reference to `H5open' nc4hdf.c:(.text+0x11aa): undefined reference to `H5P_CLS_DATASET_CREATE_ID_g' nc4hdf.c:(.text+0x11b1): undefined reference to `H5Pcreate' nc4hdf.c:(.text+0x1277): undefined reference to `H5Dset_extent' nc4hdf.c:(.text+0x12ad): undefined reference to `H5Screate' nc4hdf.c:(.text+0x12c6): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x12eb): undefined reference to `H5Aopen_by_name' nc4hdf.c:(.text+0x12f2): undefined reference to `H5open' nc4hdf.c:(.text+0x12f9): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x130f): undefined reference to `H5Acreate1' nc4hdf.c:(.text+0x131e): undefined reference to `H5open' nc4hdf.c:(.text+0x1325): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x1336): undefined reference to `H5Awrite' nc4hdf.c:(.text+0x1345): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x1354): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x137a): undefined reference to `H5Pset_obj_track_times' nc4hdf.c:(.text+0x13b5): undefined reference to `H5Pset_chunk' nc4hdf.c:(.text+0x13f2): undefined reference to `H5Screate_simple' nc4hdf.c:(.text+0x140c): undefined reference to `H5Pset_attr_creation_order' nc4hdf.c:(.text+0x141f): undefined reference to `H5open' nc4hdf.c:(.text+0x1426): undefined reference to `H5T_IEEE_F32BE_g' nc4hdf.c:(.text+0x143a): undefined reference to `H5Dcreate1' nc4hdf.c:(.text+0x144e): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x145e): undefined reference to `H5Pclose' nc4hdf.c:(.text+0x148d): undefined reference to `H5DSset_scale' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `write_var': nc4hdf.c:(.text+0x1756): undefined reference to `H5Lexists' nc4hdf.c:(.text+0x1781): undefined reference to `H5Gget_objinfo' nc4hdf.c:(.text+0x1849): undefined reference to `H5Dclose' nc4hdf.c:(.text+0x187e): undefined reference to `H5Gunlink' nc4hdf.c:(.text+0x18c2): undefined reference to `H5Screate' nc4hdf.c:(.text+0x18d9): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x18fe): undefined reference to `H5Aopen_by_name' nc4hdf.c:(.text+0x1905): undefined reference to `H5open' nc4hdf.c:(.text+0x190c): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x1923): undefined reference to `H5Acreate1' nc4hdf.c:(.text+0x1934): undefined reference to `H5open' nc4hdf.c:(.text+0x193b): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x194d): undefined reference to `H5Awrite' nc4hdf.c:(.text+0x195d): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x196d): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x19b3): undefined reference to `H5open' nc4hdf.c:(.text+0x19ba): undefined reference to `H5P_CLS_DATASET_CREATE_ID_g' nc4hdf.c:(.text+0x19c1): undefined reference to `H5Pcreate' nc4hdf.c:(.text+0x19ef): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x1a0f): undefined reference to `H5Pclose' nc4hdf.c:(.text+0x1a27): undefined reference to `H5Pclose' nc4hdf.c:(.text+0x1a48): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x1bf3): undefined reference to `H5DSdetach_scale' nc4hdf.c:(.text+0x1d7c): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x1dac): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x1dcc): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x1ded): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x1e0e): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x1e3d): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x1eca): undefined reference to `H5Screate' nc4hdf.c:(.text+0x1f20): undefined reference to `H5Screate_simple' nc4hdf.c:(.text+0x1f7a): undefined reference to `H5Screate' nc4hdf.c:(.text+0x1fbf): undefined reference to `H5Tset_size' nc4hdf.c:(.text+0x1ff5): undefined reference to `H5Tset_strpad' nc4hdf.c:(.text+0x202e): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x2079): undefined reference to `H5Aopen' nc4hdf.c:(.text+0x20d6): undefined reference to `H5Acreate1' nc4hdf.c:(.text+0x2113): undefined reference to `H5Aget_type' nc4hdf.c:(.text+0x2143): undefined reference to `H5Aget_space' nc4hdf.c:(.text+0x217f): undefined reference to `H5Sget_simple_extent_npoints' nc4hdf.c:(.text+0x21dd): undefined reference to `H5Adelete' nc4hdf.c:(.text+0x222b): undefined reference to `H5Awrite' nc4hdf.c:(.text+0x2270): undefined reference to `H5Screate' nc4hdf.c:(.text+0x235d): undefined reference to `H5open' nc4hdf.c:(.text+0x2364): undefined reference to `H5P_CLS_DATASET_ACCESS_ID_g' nc4hdf.c:(.text+0x236b): undefined reference to `H5Pcreate' nc4hdf.c:(.text+0x23a7): undefined reference to `H5Pset_obj_track_times' nc4hdf.c:(.text+0x2407): undefined reference to `H5Pset_fill_time' nc4hdf.c:(.text+0x2432): undefined reference to `H5Pset_shuffle' nc4hdf.c:(.text+0x249e): undefined reference to `H5Pset_filter' nc4hdf.c:(.text+0x24cd): undefined reference to `H5Pset_deflate' nc4hdf.c:(.text+0x24f8): undefined reference to `H5Pset_fletcher32' nc4hdf.c:(.text+0x257c): undefined reference to `H5Pset_layout' nc4hdf.c:(.text+0x25a8): undefined reference to `H5Pset_chunk' nc4hdf.c:(.text+0x280f): undefined reference to `H5Screate' nc4hdf.c:(.text+0x28d3): undefined reference to `H5Pset_fill_value' nc4hdf.c:(.text+0x28f3): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x291c): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x2946): undefined reference to `H5Pset_fill_value' nc4hdf.c:(.text+0x2979): undefined reference to `H5Screate_simple' nc4hdf.c:(.text+0x29ab): undefined reference to `H5Pset_attr_creation_order' nc4hdf.c:(.text+0x29f9): undefined reference to `H5Pset_chunk_cache' nc4hdf.c:(.text+0x2a45): undefined reference to `H5Dcreate2' nc4hdf.c:(.text+0x2a93): undefined reference to `H5DSset_scale' nc4hdf.c:(.text+0x2add): undefined reference to `H5Screate' nc4hdf.c:(.text+0x2b08): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x2b3d): undefined reference to `H5Aopen_by_name' nc4hdf.c:(.text+0x2b4c): undefined reference to `H5open' nc4hdf.c:(.text+0x2b53): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x2b6a): undefined reference to `H5Acreate1' nc4hdf.c:(.text+0x2b8c): undefined reference to `H5open' nc4hdf.c:(.text+0x2b93): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x2ba2): undefined reference to `H5Awrite' nc4hdf.c:(.text+0x2bc2): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x2be2): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x2c10): undefined reference to `H5Screate_simple' nc4hdf.c:(.text+0x2ca4): undefined reference to `H5open' nc4hdf.c:(.text+0x2cab): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x2cca): undefined reference to `H5Acreate1' nc4hdf.c:(.text+0x2cf7): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x2d2c): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x2d5f): undefined reference to `H5open' nc4hdf.c:(.text+0x2d77): undefined reference to `H5Awrite' nc4hdf.c:(.text+0x2eae): undefined reference to `H5Pset_szip' nc4hdf.c:(.text+0x2f60): undefined reference to `H5Lexists' nc4hdf.c:(.text+0x2f81): undefined reference to `H5Gget_objinfo' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `nc4_get_hdf_typeid': nc4hdf.c:(.text+0x3107): undefined reference to `H5open' nc4hdf.c:(.text+0x310e): undefined reference to `H5T_C_S1_g' nc4hdf.c:(.text+0x3115): undefined reference to `H5Tcopy' nc4hdf.c:(.text+0x312d): undefined reference to `H5Tset_size' nc4hdf.c:(.text+0x314a): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x3187): undefined reference to `H5open' nc4hdf.c:(.text+0x318e): undefined reference to `H5T_STD_U64LE_g' nc4hdf.c:(.text+0x319f): undefined reference to `H5open' nc4hdf.c:(.text+0x31a6): undefined reference to `H5T_STD_U64BE_g' nc4hdf.c:(.text+0x31b2): undefined reference to `H5open' nc4hdf.c:(.text+0x31b9): undefined reference to `H5T_NATIVE_ULLONG_g' nc4hdf.c:(.text+0x31ca): undefined reference to `H5open' nc4hdf.c:(.text+0x31d1): undefined reference to `H5T_STD_I64LE_g' nc4hdf.c:(.text+0x31e2): undefined reference to `H5open' nc4hdf.c:(.text+0x31e9): undefined reference to `H5T_STD_I64BE_g' nc4hdf.c:(.text+0x31f5): undefined reference to `H5open' nc4hdf.c:(.text+0x31fc): undefined reference to `H5T_NATIVE_LLONG_g' nc4hdf.c:(.text+0x320d): undefined reference to `H5open' nc4hdf.c:(.text+0x3214): undefined reference to `H5T_STD_U32LE_g' nc4hdf.c:(.text+0x3225): undefined reference to `H5open' nc4hdf.c:(.text+0x322c): undefined reference to `H5T_STD_U32BE_g' nc4hdf.c:(.text+0x3238): undefined reference to `H5open' nc4hdf.c:(.text+0x323f): undefined reference to `H5T_NATIVE_UINT_g' nc4hdf.c:(.text+0x3250): undefined reference to `H5open' nc4hdf.c:(.text+0x3257): undefined reference to `H5T_STD_U16LE_g' nc4hdf.c:(.text+0x3268): undefined reference to `H5open' nc4hdf.c:(.text+0x326f): undefined reference to `H5T_STD_U16BE_g' nc4hdf.c:(.text+0x327b): undefined reference to `H5open' nc4hdf.c:(.text+0x3282): undefined reference to `H5T_NATIVE_USHORT_g' nc4hdf.c:(.text+0x3293): undefined reference to `H5open' nc4hdf.c:(.text+0x329a): undefined reference to `H5T_STD_U8LE_g' nc4hdf.c:(.text+0x32ab): undefined reference to `H5open' nc4hdf.c:(.text+0x32b2): undefined reference to `H5T_STD_U8BE_g' nc4hdf.c:(.text+0x32be): undefined reference to `H5open' nc4hdf.c:(.text+0x32c5): undefined reference to `H5T_NATIVE_UCHAR_g' nc4hdf.c:(.text+0x32d6): undefined reference to `H5open' nc4hdf.c:(.text+0x32dd): undefined reference to `H5T_IEEE_F64LE_g' nc4hdf.c:(.text+0x32ee): undefined reference to `H5open' nc4hdf.c:(.text+0x32f5): undefined reference to `H5T_IEEE_F64BE_g' nc4hdf.c:(.text+0x3301): undefined reference to `H5open' nc4hdf.c:(.text+0x3308): undefined reference to `H5T_NATIVE_DOUBLE_g' nc4hdf.c:(.text+0x3319): undefined reference to `H5open' nc4hdf.c:(.text+0x3320): undefined reference to `H5T_IEEE_F32LE_g' nc4hdf.c:(.text+0x3331): undefined reference to `H5open' nc4hdf.c:(.text+0x3338): undefined reference to `H5T_IEEE_F32BE_g' nc4hdf.c:(.text+0x3344): undefined reference to `H5open' nc4hdf.c:(.text+0x334b): undefined reference to `H5T_NATIVE_FLOAT_g' nc4hdf.c:(.text+0x335c): undefined reference to `H5open' nc4hdf.c:(.text+0x3363): undefined reference to `H5T_STD_I32LE_g' nc4hdf.c:(.text+0x3374): undefined reference to `H5open' nc4hdf.c:(.text+0x337b): undefined reference to `H5T_STD_I32BE_g' nc4hdf.c:(.text+0x3387): undefined reference to `H5open' nc4hdf.c:(.text+0x338e): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x339f): undefined reference to `H5open' nc4hdf.c:(.text+0x33a6): undefined reference to `H5T_STD_I16LE_g' nc4hdf.c:(.text+0x33b7): undefined reference to `H5open' nc4hdf.c:(.text+0x33be): undefined reference to `H5T_STD_I16BE_g' nc4hdf.c:(.text+0x33c7): undefined reference to `H5open' nc4hdf.c:(.text+0x33ce): undefined reference to `H5T_NATIVE_SHORT_g' nc4hdf.c:(.text+0x3406): undefined reference to `H5open' nc4hdf.c:(.text+0x340d): undefined reference to `H5T_STD_I8LE_g' nc4hdf.c:(.text+0x341b): undefined reference to `H5open' nc4hdf.c:(.text+0x3422): undefined reference to `H5T_STD_I8BE_g' nc4hdf.c:(.text+0x342b): undefined reference to `H5open' nc4hdf.c:(.text+0x3432): undefined reference to `H5T_NATIVE_SCHAR_g' nc4hdf.c:(.text+0x3441): undefined reference to `H5Tcopy' nc4hdf.c:(.text+0x346d): undefined reference to `H5Tset_cset' nc4hdf.c:(.text+0x3480): undefined reference to `H5open' nc4hdf.c:(.text+0x3487): undefined reference to `H5T_C_S1_g' nc4hdf.c:(.text+0x348e): undefined reference to `H5Tcopy' nc4hdf.c:(.text+0x34a1): undefined reference to `H5Tset_strpad' nc4hdf.c:(.text+0x34b2): undefined reference to `H5Tset_cset' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `rec_detach_scales': nc4hdf.c:(.text+0x365b): undefined reference to `H5DSdetach_scale' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `remove_coord_atts': nc4hdf.c:(.text+0x36f0): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x3705): undefined reference to `H5Adelete' nc4hdf.c:(.text+0x3718): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x372d): undefined reference to `H5Adelete' nc4hdf.c:(.text+0x3740): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x3755): undefined reference to `H5Adelete' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `rec_reattach_scales': nc4hdf.c:(.text+0x388a): undefined reference to `H5DSattach_scale' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `nc4_rec_write_groups_types': nc4hdf.c:(.text+0x39b3): undefined reference to `H5open' nc4hdf.c:(.text+0x39ba): undefined reference to `H5P_CLS_GROUP_CREATE_ID_g' nc4hdf.c:(.text+0x39c1): undefined reference to `H5Pcreate' nc4hdf.c:(.text+0x39e0): undefined reference to `H5Gclose' nc4hdf.c:(.text+0x3a8d): undefined reference to `H5Aexists' nc4hdf.c:(.text+0x3aa2): undefined reference to `H5Screate' nc4hdf.c:(.text+0x3ac1): undefined reference to `H5open' nc4hdf.c:(.text+0x3ac8): undefined reference to `H5T_NATIVE_INT_g' nc4hdf.c:(.text+0x3ae1): undefined reference to `H5Acreate1' nc4hdf.c:(.text+0x3afc): undefined reference to `H5Sclose' nc4hdf.c:(.text+0x3b1a): undefined reference to `H5Aclose' nc4hdf.c:(.text+0x3b2d): undefined reference to `H5open' nc4hdf.c:(.text+0x3b3d): undefined reference to `H5Awrite' nc4hdf.c:(.text+0x3b67): undefined reference to `H5Pset_obj_track_times' nc4hdf.c:(.text+0x3b79): undefined reference to `H5Pclose' nc4hdf.c:(.text+0x3b9c): undefined reference to `H5Pset_link_creation_order' nc4hdf.c:(.text+0x3bad): undefined reference to `H5Pset_attr_creation_order' nc4hdf.c:(.text+0x3bc5): undefined reference to `H5Gcreate2' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `commit_type': nc4hdf.c:(.text+0x3cb4): undefined reference to `H5Tcreate' nc4hdf.c:(.text+0x3d21): undefined reference to `H5Tenum_create' nc4hdf.c:(.text+0x3d6a): undefined reference to `H5Tenum_insert' nc4hdf.c:(.text+0x3dac): undefined reference to `H5Tvlen_create' nc4hdf.c:(.text+0x3dc8): undefined reference to `H5Tcommit1' nc4hdf.c:(.text+0x3de5): undefined reference to `H5Tget_native_type' nc4hdf.c:(.text+0x3e2a): undefined reference to `H5Tcreate' nc4hdf.c:(.text+0x4093): undefined reference to `H5Tarray_create1' nc4hdf.c:(.text+0x40a7): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x40ce): undefined reference to `H5Tinsert' nc4hdf.c:(.text+0x40de): undefined reference to `H5Tclose' nc4hdf.c:(.text+0x410f): undefined reference to `H5Tclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `nc4_rec_match_dimscales': nc4hdf.c:(.text+0xa2da): undefined reference to `H5Dget_space' nc4hdf.c:(.text+0xa328): undefined reference to `H5Sget_simple_extent_dims' nc4hdf.c:(.text+0xa342): undefined reference to `H5Sget_simple_extent_type' nc4hdf.c:(.text+0xa351): undefined reference to `H5Sclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `reportobject': nc4hdf.c:(.text+0xa77b): undefined reference to `H5Iget_name' nc4hdf.c:(.text+0xa7c0): undefined reference to `H5Aget_name' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `reportopenobjects': nc4hdf.c:(.text+0xa958): undefined reference to `H5Fget_obj_count' nc4hdf.c:(.text+0xa999): undefined reference to `H5Fget_obj_ids' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `NC4_hdf5get_libversion': nc4hdf.c:(.text+0xaa12): undefined reference to `H5get_libversion' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `NC4_hdf5get_superblock': nc4hdf.c:(.text+0xaa4f): undefined reference to `H5Fget_create_plist' nc4hdf.c:(.text+0xaa6f): undefined reference to `H5Pget_version' nc4hdf.c:(.text+0xaa85): undefined reference to `H5Pclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `NC4_isnetcdf4': nc4hdf.c:(.text+0xaae1): undefined reference to `H5Aopen_name' nc4hdf.c:(.text+0xaaec): undefined reference to `H5Aclose' nc4hdf.c:(.text+0xab18): undefined reference to `H5Gget_num_objs' nc4hdf.c:(.text+0xab4e): undefined reference to `H5Gget_objname_by_idx' nc4hdf.c:(.text+0xab62): undefined reference to `H5Gget_objtype_by_idx' nc4hdf.c:(.text+0xab72): undefined reference to `H5Gopen1' nc4hdf.c:(.text+0xab8d): undefined reference to `H5Gclose' nc4hdf.c:(.text+0xabe4): undefined reference to `H5Dopen1' nc4hdf.c:(.text+0xabef): undefined reference to `H5Aget_num_attrs' nc4hdf.c:(.text+0xac1f): undefined reference to `H5Aopen_idx' nc4hdf.c:(.text+0xac38): undefined reference to `H5Aget_name' nc4hdf.c:(.text+0xac5a): undefined reference to `H5Aclose' nc4hdf.c:(.text+0xac80): undefined reference to `H5Dclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4hdf.o): In function `NC4_walk': nc4hdf.c:(.text+0xad0d): undefined reference to `H5Gget_num_objs' nc4hdf.c:(.text+0xad50): undefined reference to `H5Gget_objname_by_idx' nc4hdf.c:(.text+0xad64): undefined reference to `H5Gget_objtype_by_idx' nc4hdf.c:(.text+0xad74): undefined reference to `H5Gopen1' nc4hdf.c:(.text+0xad8a): undefined reference to `H5Gclose' nc4hdf.c:(.text+0xadde): undefined reference to `H5Dopen1' nc4hdf.c:(.text+0xade9): undefined reference to `H5Aget_num_attrs' nc4hdf.c:(.text+0xae19): undefined reference to `H5Aopen_idx' nc4hdf.c:(.text+0xae32): undefined reference to `H5Aget_name' nc4hdf.c:(.text+0xae55): undefined reference to `H5Aclose' nc4hdf.c:(.text+0xae7b): undefined reference to `H5Dclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5attr.o): In function `NC4_rename_att': hdf5attr.c:(.text+0x29b): undefined reference to `H5Adelete' hdf5attr.c:(.text+0x373): undefined reference to `H5Adelete' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5attr.o): In function `NC4_del_att': hdf5attr.c:(.text+0x596): undefined reference to `H5Adelete' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5create.o): In function `NC4_create': hdf5create.c:(.text+0x91): undefined reference to `H5Pclose' hdf5create.c:(.text+0x1d7): undefined reference to `H5check_version' hdf5create.c:(.text+0x1f2): undefined reference to `H5check_version' hdf5create.c:(.text+0x232): undefined reference to `H5open' hdf5create.c:(.text+0x239): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' hdf5create.c:(.text+0x240): undefined reference to `H5Pcreate' hdf5create.c:(.text+0x267): undefined reference to `H5Pset_fclose_degree' hdf5create.c:(.text+0x2a5): undefined reference to `H5Pset_fapl_mpio' hdf5create.c:(.text+0x2cf): undefined reference to `MPI_Comm_dup' hdf5create.c:(.text+0x303): undefined reference to `MPI_Info_dup' hdf5create.c:(.text+0x327): undefined reference to `H5Pset_libver_bounds' hdf5create.c:(.text+0x345): undefined reference to `MPI_Comm_free' hdf5create.c:(.text+0x367): undefined reference to `MPI_Info_free' hdf5create.c:(.text+0x37b): undefined reference to `H5Pclose' hdf5create.c:(.text+0x38c): undefined reference to `H5open' hdf5create.c:(.text+0x393): undefined reference to `H5P_CLS_FILE_CREATE_ID_g' hdf5create.c:(.text+0x39a): undefined reference to `H5Pcreate' hdf5create.c:(.text+0x3a9): undefined reference to `H5Pset_obj_track_times' hdf5create.c:(.text+0x3bd): undefined reference to `H5Pset_link_creation_order' hdf5create.c:(.text+0x3d1): undefined reference to `H5Pset_attr_creation_order' hdf5create.c:(.text+0x489): undefined reference to `H5Pset_fapl_core' hdf5create.c:(.text+0x4a6): undefined reference to `H5Fcreate' hdf5create.c:(.text+0x4e7): undefined reference to `H5Gopen2' hdf5create.c:(.text+0x507): undefined reference to `H5Pclose' hdf5create.c:(.text+0x516): undefined reference to `H5Pclose' hdf5create.c:(.text+0x554): undefined reference to `H5Fcreate' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5file.o): In function `nc4_enddef_netcdf4_file': hdf5file.c:(.text+0x2ed): undefined reference to `H5Fflush' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5file.o): In function `NC4_sync': hdf5file.c:(.text+0x4dc): undefined reference to `H5Fflush' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5file.o): In function `nc4_close_hdf5_file': hdf5file.c:(.text+0x69b): undefined reference to `H5Fflush' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5file.o): In function `nc4_close_netcdf4_file': hdf5file.c:(.text+0x79d): undefined reference to `MPI_Comm_free' hdf5file.c:(.text+0x7b2): undefined reference to `MPI_Info_free' hdf5file.c:(.text+0x7d6): undefined reference to `H5Fclose' hdf5file.c:(.text+0x891): undefined reference to `H5Fget_obj_count' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5grp.o): In function `NC4_rename_grp': hdf5grp.c:(.text+0x22f): undefined reference to `H5Gclose' hdf5grp.c:(.text+0x25b): undefined reference to `H5Gmove' hdf5grp.c:(.text+0x271): undefined reference to `H5Gopen2' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5internal.o): In function `nc4_rec_find_hdf_type': hdf5internal.c:(.text+0x8a): undefined reference to `H5Tequal' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5internal.o): In function `nc4_find_dim_len': hdf5internal.c:(.text+0x26c): undefined reference to `H5Dget_space' hdf5internal.c:(.text+0x298): undefined reference to `H5Sget_simple_extent_type' hdf5internal.c:(.text+0x2d1): undefined reference to `H5Sget_simple_extent_ndims' hdf5internal.c:(.text+0x2f7): undefined reference to `H5Sclose' hdf5internal.c:(.text+0x3bd): undefined reference to `H5Sget_simple_extent_dims' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5internal.o): In function `delete_existing_dimscale_dataset': hdf5internal.c:(.text+0x613): undefined reference to `H5Dclose' hdf5internal.c:(.text+0x62a): undefined reference to `H5Gunlink' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5internal.o): In function `nc4_reform_coord_var': hdf5internal.c:(.text+0x713): undefined reference to `H5Dclose' hdf5internal.c:(.text+0x803): undefined reference to `H5Gunlink' hdf5internal.c:(.text+0x85b): undefined reference to `H5DSdetach_scale' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5internal.o): In function `nc4_rec_grp_HDF5_del': hdf5internal.c:(.text+0xa27): undefined reference to `H5Tclose' hdf5internal.c:(.text+0xab9): undefined reference to `H5Dclose' hdf5internal.c:(.text+0xb03): undefined reference to `H5Tclose' hdf5internal.c:(.text+0xbb4): undefined reference to `H5Dclose' hdf5internal.c:(.text+0xc39): undefined reference to `H5Tclose' hdf5internal.c:(.text+0xc50): undefined reference to `H5Tclose' hdf5internal.c:(.text+0xc93): undefined reference to `H5Tclose' hdf5internal.c:(.text+0xcae): undefined reference to `H5Tclose' hdf5internal.c:(.text+0xcf5): undefined reference to `H5Gclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5internal.o): In function `nc4_hdf5_initialize': hdf5internal.c:(.text+0xd48): undefined reference to `H5Eset_auto2' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5open.o): In function `dimscale_visitor': hdf5open.c:(.text+0x1c): undefined reference to `H5Gget_objinfo' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5open.o): In function `nc4_rec_read_metadata': hdf5open.c:(.text+0xd0): undefined reference to `H5Gopen2' hdf5open.c:(.text+0xe8): undefined reference to `H5Gget_create_plist' hdf5open.c:(.text+0xf8): undefined reference to `H5Pget_link_creation_order' hdf5open.c:(.text+0x100): undefined reference to `H5Pclose' hdf5open.c:(.text+0x145): undefined reference to `H5Literate' hdf5open.c:(.text+0x1ca): undefined reference to `H5Oclose' hdf5open.c:(.text+0x23c): undefined reference to `H5Gopen2' hdf5open.c:(.text+0x2be): undefined reference to `H5Oclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5open.o): In function `NC4_open': hdf5open.c:(.text+0x3e8): undefined reference to `H5check_version' hdf5open.c:(.text+0x40b): undefined reference to `H5check_version' hdf5open.c:(.text+0x505): undefined reference to `H5open' hdf5open.c:(.text+0x50c): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' hdf5open.c:(.text+0x513): undefined reference to `H5Pcreate' hdf5open.c:(.text+0x52c): undefined reference to `H5Pclose' hdf5open.c:(.text+0x53d): undefined reference to `H5Pset_fclose_degree' hdf5open.c:(.text+0x572): undefined reference to `H5Pset_fapl_mpio' hdf5open.c:(.text+0x633): undefined reference to `H5Pset_fapl_core' hdf5open.c:(.text+0x64e): undefined reference to `H5Fopen' hdf5open.c:(.text+0x670): undefined reference to `MPI_Comm_free' hdf5open.c:(.text+0x67e): undefined reference to `MPI_Info_free' hdf5open.c:(.text+0x6c3): undefined reference to `H5Aexists' hdf5open.c:(.text+0x733): undefined reference to `H5Aexists' hdf5open.c:(.text+0x760): undefined reference to `H5Pclose' hdf5open.c:(.text+0x791): undefined reference to `H5Fopen' hdf5open.c:(.text+0x7b6): undefined reference to `MPI_Comm_dup' hdf5open.c:(.text+0x7ef): undefined reference to `MPI_Info_dup' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5open.o): In function `get_netcdf_type': hdf5open.c:(.text+0x8b4): undefined reference to `H5Tget_class' hdf5open.c:(.text+0x8d5): undefined reference to `H5open' hdf5open.c:(.text+0x8dc): undefined reference to `H5T_NATIVE_SCHAR_g' hdf5open.c:(.text+0x8e6): undefined reference to `H5Tequal' hdf5open.c:(.text+0x905): undefined reference to `H5open' hdf5open.c:(.text+0x90c): undefined reference to `H5T_NATIVE_SHORT_g' hdf5open.c:(.text+0x916): undefined reference to `H5Tequal' hdf5open.c:(.text+0x935): undefined reference to `H5open' hdf5open.c:(.text+0x93c): undefined reference to `H5T_NATIVE_INT_g' hdf5open.c:(.text+0x946): undefined reference to `H5Tequal' hdf5open.c:(.text+0x965): undefined reference to `H5open' hdf5open.c:(.text+0x96c): undefined reference to `H5T_NATIVE_FLOAT_g' hdf5open.c:(.text+0x976): undefined reference to `H5Tequal' hdf5open.c:(.text+0x995): undefined reference to `H5open' hdf5open.c:(.text+0x99c): undefined reference to `H5T_NATIVE_DOUBLE_g' hdf5open.c:(.text+0x9a6): undefined reference to `H5Tequal' hdf5open.c:(.text+0x9c5): undefined reference to `H5open' hdf5open.c:(.text+0x9cc): undefined reference to `H5T_NATIVE_UCHAR_g' hdf5open.c:(.text+0x9d6): undefined reference to `H5Tequal' hdf5open.c:(.text+0x9f5): undefined reference to `H5open' hdf5open.c:(.text+0x9fc): undefined reference to `H5T_NATIVE_USHORT_g' hdf5open.c:(.text+0xa06): undefined reference to `H5Tequal' hdf5open.c:(.text+0xa25): undefined reference to `H5open' hdf5open.c:(.text+0xa2c): undefined reference to `H5T_NATIVE_UINT_g' hdf5open.c:(.text+0xa36): undefined reference to `H5Tequal' hdf5open.c:(.text+0xa55): undefined reference to `H5open' hdf5open.c:(.text+0xa5c): undefined reference to `H5T_NATIVE_LLONG_g' hdf5open.c:(.text+0xa66): undefined reference to `H5Tequal' hdf5open.c:(.text+0xa85): undefined reference to `H5open' hdf5open.c:(.text+0xa8c): undefined reference to `H5T_NATIVE_ULLONG_g' hdf5open.c:(.text+0xa96): undefined reference to `H5Tequal' hdf5open.c:(.text+0xaea): undefined reference to `H5Tis_variable_str' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5open.o): In function `att_read_callbk': hdf5open.c:(.text+0xc0d): undefined reference to `H5Aopen' hdf5open.c:(.text+0xc70): undefined reference to `H5Aget_type' hdf5open.c:(.text+0xc83): undefined reference to `H5Tget_native_type' hdf5open.c:(.text+0xc9e): undefined reference to `H5Tclose' hdf5open.c:(.text+0xcb4): undefined reference to `H5Sclose' hdf5open.c:(.text+0xcd0): undefined reference to `H5Aclose' hdf5open.c:(.text+0xd19): undefined reference to `H5Tget_class' hdf5open.c:(.text+0xd5c): undefined reference to `H5Tget_class' hdf5open.c:(.text+0xd83): undefined reference to `H5open' hdf5open.c:(.text+0xd8a): undefined reference to `H5T_NATIVE_SCHAR_g' hdf5open.c:(.text+0xd95): undefined reference to `H5Tequal' hdf5open.c:(.text+0xdbb): undefined reference to `H5open' hdf5open.c:(.text+0xdc2): undefined reference to `H5T_NATIVE_SHORT_g' hdf5open.c:(.text+0xdcd): undefined reference to `H5Tequal' hdf5open.c:(.text+0xdf3): undefined reference to `H5open' hdf5open.c:(.text+0xdfa): undefined reference to `H5T_NATIVE_INT_g' hdf5open.c:(.text+0xe05): undefined reference to `H5Tequal' hdf5open.c:(.text+0xe2b): undefined reference to `H5open' hdf5open.c:(.text+0xe32): undefined reference to `H5T_NATIVE_FLOAT_g' hdf5open.c:(.text+0xe3d): undefined reference to `H5Tequal' hdf5open.c:(.text+0xe63): undefined reference to `H5open' hdf5open.c:(.text+0xe6a): undefined reference to `H5T_NATIVE_DOUBLE_g' hdf5open.c:(.text+0xe75): undefined reference to `H5Tequal' hdf5open.c:(.text+0xe9b): undefined reference to `H5open' hdf5open.c:(.text+0xea2): undefined reference to `H5T_NATIVE_UCHAR_g' hdf5open.c:(.text+0xead): undefined reference to `H5Tequal' hdf5open.c:(.text+0xed3): undefined reference to `H5open' hdf5open.c:(.text+0xeda): undefined reference to `H5T_NATIVE_USHORT_g' hdf5open.c:(.text+0xee5): undefined reference to `H5Tequal' hdf5open.c:(.text+0xf0b): undefined reference to `H5open' hdf5open.c:(.text+0xf12): undefined reference to `H5T_NATIVE_UINT_g' hdf5open.c:(.text+0xf1d): undefined reference to `H5Tequal' hdf5open.c:(.text+0xf43): undefined reference to `H5open' hdf5open.c:(.text+0xf4a): undefined reference to `H5T_NATIVE_LLONG_g' hdf5open.c:(.text+0xf55): undefined reference to `H5Tequal' hdf5open.c:(.text+0xf78): undefined reference to `H5open' hdf5open.c:(.text+0xf7f): undefined reference to `H5T_NATIVE_ULLONG_g' hdf5open.c:(.text+0xf8a): undefined reference to `H5Tequal' hdf5open.c:(.text+0xfd2): undefined reference to `H5Aget_space' hdf5open.c:(.text+0x1016): undefined reference to `H5Sget_simple_extent_ndims' hdf5open.c:(.text+0x102b): undefined reference to `H5Sget_simple_extent_npoints' hdf5open.c:(.text+0x1073): undefined reference to `H5Tget_size' hdf5open.c:(.text+0x10a3): undefined reference to `H5Sget_simple_extent_type' hdf5open.c:(.text+0x10dd): undefined reference to `H5Sget_simple_extent_dims' hdf5open.c:(.text+0x1131): undefined reference to `H5Tclose' hdf5open.c:(.text+0x11d4): undefined reference to `H5Sclose' hdf5open.c:(.text+0x120c): undefined reference to `H5Aread' hdf5open.c:(.text+0x1285): undefined reference to `H5Aread' hdf5open.c:(.text+0x12ac): undefined reference to `H5Aread' hdf5open.c:(.text+0x138d): undefined reference to `H5Aread' hdf5open.c:(.text+0x13b1): undefined reference to `H5Tis_variable_str' hdf5open.c:(.text+0x140b): undefined reference to `H5Tis_variable_str' hdf5open.c:(.text+0x1427): undefined reference to `H5Tget_size' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5open.o): In function `nc4_read_atts': hdf5open.c:(.text+0x1512): undefined reference to `H5Aiterate2' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5open.o): In function `nc4_rec_read_metadata_cb': hdf5open.c:(.text+0x158d): undefined reference to `H5Oopen' hdf5open.c:(.text+0x15ae): undefined reference to `H5Oclose' hdf5open.c:(.text+0x15e9): undefined reference to `H5Gget_objinfo' hdf5open.c:(.text+0x1636): undefined reference to `H5Dget_space' hdf5open.c:(.text+0x1650): undefined reference to `H5Sclose' hdf5open.c:(.text+0x1670): undefined reference to `H5Oclose' hdf5open.c:(.text+0x16ae): undefined reference to `H5Tget_native_type' hdf5open.c:(.text+0x16c2): undefined reference to `H5Tget_size' hdf5open.c:(.text+0x170b): undefined reference to `H5Iinc_ref' hdf5open.c:(.text+0x171f): undefined reference to `H5Tget_class' hdf5open.c:(.text+0x1752): undefined reference to `H5Tis_variable_str' hdf5open.c:(.text+0x177e): undefined reference to `H5Tget_super' hdf5open.c:(.text+0x1792): undefined reference to `H5Tget_size' hdf5open.c:(.text+0x17eb): undefined reference to `H5Tget_super' hdf5open.c:(.text+0x17ff): undefined reference to `H5Tget_size' hdf5open.c:(.text+0x1841): undefined reference to `H5Tget_nmembers' hdf5open.c:(.text+0x18a1): undefined reference to `H5Tget_member_name' hdf5open.c:(.text+0x18f3): undefined reference to `H5Tget_member_value' hdf5open.c:(.text+0x1924): undefined reference to `H5free_memory' hdf5open.c:(.text+0x195c): undefined reference to `H5Tget_nmembers' hdf5open.c:(.text+0x19c8): undefined reference to `H5Tget_member_type' hdf5open.c:(.text+0x19de): undefined reference to `H5Tget_native_type' hdf5open.c:(.text+0x19fb): undefined reference to `H5Tget_member_name' hdf5open.c:(.text+0x1a52): undefined reference to `H5Tget_member_offset' hdf5open.c:(.text+0x1a5f): undefined reference to `H5Tget_class' hdf5open.c:(.text+0x1ac5): undefined reference to `H5free_memory' hdf5open.c:(.text+0x1bc0): undefined reference to `H5Sget_simple_extent_ndims' hdf5open.c:(.text+0x1be2): undefined reference to `H5DSis_scale' hdf5open.c:(.text+0x1d2b): undefined reference to `H5Idec_ref' hdf5open.c:(.text+0x1d61): undefined reference to `H5Pclose' hdf5open.c:(.text+0x1d82): undefined reference to `H5Pclose' hdf5open.c:(.text+0x1db3): undefined reference to `H5Sget_simple_extent_dims' hdf5open.c:(.text+0x1e35): undefined reference to `H5Aexists' hdf5open.c:(.text+0x1e89): undefined reference to `H5Aopen_name' hdf5open.c:(.text+0x1eb2): undefined reference to `H5Aclose' hdf5open.c:(.text+0x1fb9): undefined reference to `H5DSget_scale_name' hdf5open.c:(.text+0x1ff5): undefined reference to `H5Iinc_ref' hdf5open.c:(.text+0x2051): undefined reference to `H5open' hdf5open.c:(.text+0x2058): undefined reference to `H5T_NATIVE_INT_g' hdf5open.c:(.text+0x2067): undefined reference to `H5Aread' hdf5open.c:(.text+0x209f): undefined reference to `H5Iinc_ref' hdf5open.c:(.text+0x20be): undefined reference to `H5Dget_access_plist' hdf5open.c:(.text+0x20ff): undefined reference to `H5Pget_chunk_cache' hdf5open.c:(.text+0x212c): undefined reference to `H5Dget_create_plist' hdf5open.c:(.text+0x2148): undefined reference to `H5Pget_layout' hdf5open.c:(.text+0x217f): undefined reference to `H5Pget_nfilters' hdf5open.c:(.text+0x21c3): undefined reference to `H5Pget_filter2' hdf5open.c:(.text+0x2299): undefined reference to `H5Pget_filter2' hdf5open.c:(.text+0x232b): undefined reference to `H5Pget_filter2' hdf5open.c:(.text+0x238f): undefined reference to `H5open' hdf5open.c:(.text+0x2396): undefined reference to `H5T_NATIVE_SCHAR_g' hdf5open.c:(.text+0x23a3): undefined reference to `H5open' hdf5open.c:(.text+0x23aa): undefined reference to `H5T_NATIVE_SHORT_g' hdf5open.c:(.text+0x23b7): undefined reference to `H5open' hdf5open.c:(.text+0x23be): undefined reference to `H5T_NATIVE_INT_g' hdf5open.c:(.text+0x23cb): undefined reference to `H5open' hdf5open.c:(.text+0x23d2): undefined reference to `H5T_NATIVE_FLOAT_g' hdf5open.c:(.text+0x23df): undefined reference to `H5open' hdf5open.c:(.text+0x23e6): undefined reference to `H5T_NATIVE_DOUBLE_g' hdf5open.c:(.text+0x23f3): undefined reference to `H5open' hdf5open.c:(.text+0x23fa): undefined reference to `H5T_NATIVE_UCHAR_g' hdf5open.c:(.text+0x2407): undefined reference to `H5open' hdf5open.c:(.text+0x240e): undefined reference to `H5T_NATIVE_USHORT_g' hdf5open.c:(.text+0x241b): undefined reference to `H5open' hdf5open.c:(.text+0x2422): undefined reference to `H5T_NATIVE_UINT_g' hdf5open.c:(.text+0x242f): undefined reference to `H5open' hdf5open.c:(.text+0x2436): undefined reference to `H5T_NATIVE_LLONG_g' hdf5open.c:(.text+0x2443): undefined reference to `H5open' hdf5open.c:(.text+0x244a): undefined reference to `H5T_NATIVE_ULLONG_g' hdf5open.c:(.text+0x245a): undefined reference to `H5Dget_type' hdf5open.c:(.text+0x2472): undefined reference to `H5Tget_native_type' hdf5open.c:(.text+0x2488): undefined reference to `H5Tget_class' hdf5open.c:(.text+0x24f5): undefined reference to `H5Tequal' hdf5open.c:(.text+0x251b): undefined reference to `H5Tget_order' hdf5open.c:(.text+0x25ea): undefined reference to `H5Tclose' hdf5open.c:(.text+0x25fb): undefined reference to `H5Tclose' hdf5open.c:(.text+0x262b): undefined reference to `H5Pfill_value_defined' hdf5open.c:(.text+0x271c): undefined reference to `H5Aopen_name' hdf5open.c:(.text+0x27a4): undefined reference to `H5Tis_variable_str' hdf5open.c:(.text+0x27b3): undefined reference to `H5Tget_size' hdf5open.c:(.text+0x2806): undefined reference to `H5Aget_type' hdf5open.c:(.text+0x2819): undefined reference to `H5Aclose' hdf5open.c:(.text+0x2850): undefined reference to `H5Aget_space' hdf5open.c:(.text+0x286c): undefined reference to `H5Tclose' hdf5open.c:(.text+0x2887): undefined reference to `H5Sget_simple_extent_npoints' hdf5open.c:(.text+0x28aa): undefined reference to `H5Sclose' hdf5open.c:(.text+0x28cd): undefined reference to `H5Aread' hdf5open.c:(.text+0x2974): undefined reference to `H5DSget_num_scales' hdf5open.c:(.text+0x2a0a): undefined reference to `H5DSiterate_scales' hdf5open.c:(.text+0x2ad4): undefined reference to `H5Pget_fill_value' hdf5open.c:(.text+0x2b5c): undefined reference to `H5Pget_chunk' hdf5open.c:(.text+0x2c0d): undefined reference to `H5free_memory' hdf5open.c:(.text+0x2c24): undefined reference to `H5free_memory' hdf5open.c:(.text+0x2c31): undefined reference to `H5Tget_array_ndims' hdf5open.c:(.text+0x2c50): undefined reference to `H5Tget_array_dims1' hdf5open.c:(.text+0x2d97): undefined reference to `H5Tget_super' hdf5open.c:(.text+0x2db7): undefined reference to `H5Tget_super' hdf5open.c:(.text+0x2dc1): undefined reference to `H5Tget_super' hdf5open.c:(.text+0x2e5e): undefined reference to `H5Oclose' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(hdf5type.o): In function `NC4_inq_type_equal': hdf5type.c:(.text+0xe3): undefined reference to `H5Tequal' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4info.o): In function `NC4_read_ncproperties': nc4info.c:(.text+0x177): undefined reference to `H5Aexists' nc4info.c:(.text+0x18d): undefined reference to `H5Aopen_name' nc4info.c:(.text+0x1a1): undefined reference to `H5Aget_space' nc4info.c:(.text+0x1ac): undefined reference to `H5Aget_type' nc4info.c:(.text+0x1b5): undefined reference to `H5Tget_class' nc4info.c:(.text+0x1ce): undefined reference to `H5Aclose' nc4info.c:(.text+0x1e1): undefined reference to `H5Sclose' nc4info.c:(.text+0x1f2): undefined reference to `H5Tclose' nc4info.c:(.text+0x201): undefined reference to `H5Tclose' nc4info.c:(.text+0x239): undefined reference to `H5Tget_size' nc4info.c:(.text+0x273): undefined reference to `H5Tget_native_type' nc4info.c:(.text+0x29e): undefined reference to `H5Aread' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4info.o): In function `NC4_write_ncproperties': nc4info.c:(.text+0x677): undefined reference to `H5Aexists' nc4info.c:(.text+0x696): undefined reference to `H5Aclose' nc4info.c:(.text+0x6ad): undefined reference to `H5Sclose' nc4info.c:(.text+0x6c4): undefined reference to `H5Tclose' nc4info.c:(.text+0x717): undefined reference to `H5open' nc4info.c:(.text+0x71e): undefined reference to `H5T_C_S1_g' nc4info.c:(.text+0x725): undefined reference to `H5Tcopy' nc4info.c:(.text+0x742): undefined reference to `H5Tset_strpad' nc4info.c:(.text+0x750): undefined reference to `H5Tset_cset' nc4info.c:(.text+0x78c): undefined reference to `H5Tset_size' nc4info.c:(.text+0x7ae): undefined reference to `H5Screate' nc4info.c:(.text+0x7cd): undefined reference to `H5Acreate1' nc4info.c:(.text+0x7fb): undefined reference to `H5Awrite' /BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/Linux2_x86_64ifort/libnetcdf.a(nc4memcb.o): In function `NC4_image_init': nc4memcb.c:(.text+0x3ce): undefined reference to `H5open' nc4memcb.c:(.text+0x3d5): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' nc4memcb.c:(.text+0x3dc): undefined reference to `H5Pcreate' nc4memcb.c:(.text+0x46e): undefined reference to `H5Pset_fapl_core' nc4memcb.c:(.text+0x4f1): undefined reference to `H5Pset_file_image_callbacks' nc4memcb.c:(.text+0x505): undefined reference to `H5Pset_file_image' nc4memcb.c:(.text+0x567): undefined reference to `H5check_version' nc4memcb.c:(.text+0x583): undefined reference to `H5check_version' nc4memcb.c:(.text+0x591): undefined reference to `H5Fopen' nc4memcb.c:(.text+0x5a7): undefined reference to `H5check_version' nc4memcb.c:(.text+0x5b9): undefined reference to `H5Fcreate' nc4memcb.c:(.text+0x5db): undefined reference to `H5Eauto_is_v2' nc4memcb.c:(.text+0x5f9): undefined reference to `H5Eget_auto2' nc4memcb.c:(.text+0x604): undefined reference to `H5Eset_auto2' nc4memcb.c:(.text+0x618): undefined reference to `H5Eget_auto1' nc4memcb.c:(.text+0x621): undefined reference to `H5Eset_auto1' nc4memcb.c:(.text+0x62c): undefined reference to `H5Pclose' nc4memcb.c:(.text+0x64a): undefined reference to `H5Eset_auto2' nc4memcb.c:(.text+0x65e): undefined reference to `H5Eset_auto1' make[1]: *** [airs2m3] Error 1 make[1]: Leaving directory `/BIGDATA1/scies_jrsun_2/WLL/CMAQ_5.3.3/lib/ioapi-3.2-large/m3tools' make: *** [all] Error 2 [scies_jrsun_2@lon26%tianhe2-H ioapi-3.2-large]$