This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by netCDF configure 4.7.0, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --prefix=/home/ytang/jjoshi/softwares/cmaq_libsicc19.0/netcdf-c-4.7.0-icc19.0 --disable-netcdf-4 --disable-dap ## --------- ## ## Platform. ## ## --------- ## hostname = haze.ydcloud.com.us uname -m = x86_64 uname -r = 3.10.0-957.10.1.el7.x86_64 uname -s = Linux uname -v = #1 SMP Mon Mar 18 15:06:45 UTC 2019 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/aqf/intel/compilers_and_libraries_2019.1.144/linux/bin/intel64 PATH: /home/aqf/intel//compilers_and_libraries_2019.1.144/linux/mpi/intel64/libfabric/bin PATH: /home/aqf/intel//compilers_and_libraries_2019.1.144/linux/mpi/intel64/bin PATH: /home/aqf/intel/compilers_and_libraries_2019.1.144/linux/bin/intel64 PATH: /home/aqf/intel//compilers_and_libraries_2019.1.144/linux/mpi/intel64/libfabric/bin PATH: /home/aqf/intel//compilers_and_libraries_2019.1.144/linux/mpi/intel64/bin PATH: /home/aqf/intel/compilers_and_libraries_2019.1.144/linux/bin/intel64 PATH: /home/aqf/intel//compilers_and_libraries_2019.1.144/linux/mpi/intel64/libfabric/bin PATH: /home/aqf/intel//compilers_and_libraries_2019.1.144/linux/mpi/intel64/bin PATH: /home/aqf/intel/debugger_2019/gdb/intel64/bin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /home/ytang/.local/bin PATH: /home/ytang/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2951: netCDF 4.7.0 configure:2998: checking build system type configure:3012: result: x86_64-pc-linux-gnu configure:3032: checking host system type configure:3045: result: x86_64-pc-linux-gnu configure:3067: checking target system type configure:3080: result: x86_64-pc-linux-gnu configure:3146: checking for a BSD-compatible install configure:3214: result: /usr/bin/install -c configure:3225: checking whether build environment is sane configure:3280: result: yes configure:3431: checking for a thread-safe mkdir -p configure:3470: result: /usr/bin/mkdir -p configure:3477: checking for gawk configure:3493: found /usr/bin/gawk configure:3504: result: gawk configure:3515: checking whether make sets $(MAKE) configure:3537: result: yes configure:3566: checking whether make supports nested variables configure:3583: result: yes configure:3710: checking whether to enable maintainer-specific portions of Makefiles configure:3719: result: no configure:3736: checking user options configure:3740: checking whether a NCIO_MINBLOCKSIZE was specified configure:3750: result: 256 configure:3776: checking for valgrind configure:3806: result: no configure:4288: checking if fsync support is enabled configure:4298: result: no configure:4312: checking if jna bug workaround is enabled configure:4322: result: no configure:4331: checking whether we should build netCDF-4 configure:4350: result: no configure:4354: checking whether we should build with HDF5 configure:4366: result: no configure:4371: checking do we require hdf5 dynamic-loading support configure:4379: result: yes configure:4383: checking whether reading of HDF4 SD files is to be enabled configure:4394: result: no configure:4398: checking whether to fetch some sample HDF4 files from Unidata ftp site to test HDF4 reading (requires wget) configure:4411: result: no configure:4416: checking whether we should attempt to install netcdf-fortran (EXPERIMENTAL) configure:4424: result: no configure:4428: checking whether parallel IO tests should be run configure:4436: result: no configure:4440: checking whether a user specified program to run mpi programs configure:4450: result: mpiexec configure:4456: checking whether a default chunk size in bytes was specified configure:4466: result: 4194304 configure:4475: checking whether a maximum per-variable cache size for HDF5 was specified configure:4485: result: 67108864 configure:4494: checking whether a number of chunks for the default per-variable cache was specified configure:4504: result: 10 configure:4513: checking whether a default file cache size for HDF5 was specified configure:4523: result: 4194304 configure:4532: checking whether a default file cache maximum number of elements for HDF5 was specified configure:4542: result: 1009 configure:4551: checking whether a default cache preemption for HDF5 was specified configure:4561: result: 0.75 configure:4570: checking whether netCDF-4 logging is enabled configure:4578: result: no configure:4583: checking whether nc_set_log_level() function is included (will do nothing unless enable-logging is also used) configure:4596: result: yes configure:4600: checking whether DAP client(s) are to be built configure:4608: result: no configure:4616: checking whether make supports the include directive configure:4631: make -f confmf.GNU && cat confinc.out this is the am__doit target configure:4634: $? = 0 configure:4653: result: yes (GNU style) configure:4723: checking for gcc configure:4750: result: icc configure:4979: checking for C compiler version configure:4988: icc --version >&5 icc (ICC) 19.0.1.144 20181018 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:4999: $? = 0 configure:4988: icc -v >&5 icc version 19.0.1.144 (gcc version 8.3.0 compatibility) configure:4999: $? = 0 configure:4988: icc -V >&5 Intel(R) C Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 19.0.1.144 Build 20181018 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:4999: $? = 0 configure:4988: icc -qversion >&5 icc: command line warning #10006: ignoring unknown option '-qversion' icc: command line error: no files specified; for help type "icc -help" configure:4999: $? = 1 configure:5019: checking whether the C compiler works configure:5041: icc -DNDEBUG -DpgiFortran conftest.c >&5 configure:5045: $? = 0 configure:5093: result: yes configure:5096: checking for C compiler default output file name configure:5098: result: a.out configure:5104: checking for suffix of executables configure:5111: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:5115: $? = 0 configure:5137: result: configure:5159: checking whether we are cross compiling configure:5167: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:5171: $? = 0 configure:5178: ./conftest configure:5182: $? = 0 configure:5197: result: no configure:5202: checking for suffix of object files configure:5224: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:5228: $? = 0 configure:5249: result: o configure:5253: checking whether we are using the GNU C compiler configure:5272: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:5272: $? = 0 configure:5281: result: yes configure:5290: checking whether icc accepts -g configure:5310: icc -c -g -DNDEBUG -DpgiFortran conftest.c >&5 configure:5310: $? = 0 configure:5351: result: yes configure:5368: checking for icc option to accept ISO C89 configure:5431: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:5431: $? = 0 configure:5444: result: none needed configure:5469: checking whether icc understands -c and -o together configure:5491: icc -c conftest.c -o conftest2.o configure:5494: $? = 0 configure:5491: icc -c conftest.c -o conftest2.o configure:5494: $? = 0 configure:5506: result: yes configure:5525: checking dependency style of icc configure:5636: result: gcc3 configure:5652: checking for curl_easy_setopt in -lcurl configure:5677: icc -o conftest -DNDEBUG -DpgiFortran conftest.c -lcurl >&5 ld: cannot find -lcurl configure:5677: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char curl_easy_setopt (); | int | main () | { | return curl_easy_setopt (); | ; | return 0; | } configure:5686: result: no configure:5758: checking whether dap remote testing should be enabled (default on) configure:5769: result: no configure:5773: checking whether dap remote authorization testing should be enabled (default off) configure:5789: result: no configure:5793: checking which remote test server(s) to use configure:5808: result: 149.165.169.123:8080,remotetest.unidata.ucar.edu configure:5832: checking whether the time-consuming dap tests should be enabled (default off) configure:5843: result: no configure:5857: checking whether to enable strict null-byte header padding when reading (default off) configure:5865: result: no configure:5884: checking whether FFIO will be used configure:5892: result: no configure:5909: checking whether STDIO will be used configure:5917: result: no configure:5940: checking whether examples should be built configure:5948: result: yes configure:5960: checking whether v2 netCDF API should be built configure:5968: result: yes configure:5993: checking whether the ncgen/ncdump/nccopy should be built configure:6002: result: yes configure:6014: checking whether test should be built and run configure:6023: result: yes configure:6035: checking whether large file (> 2GB) tests should be run configure:6043: result: no configure:6060: checking whether benchmarks should be run configure:6068: result: no configure:6083: checking whether extreme numbers should be used in tests configure:6098: result: yes configure:6110: checking where to put large temp files if large file tests are run configure:6119: result: . configure:6131: checking Extra values for _NCProperties configure:6141: result: configure:6150: checking whether user-defined format 0 was specified configure:6158: result: configure:6226: checking whether a magic number for user-defined format 0 was specified configure:6234: result: configure:6238: checking whether user-defined format 1 was specified configure:6246: result: configure:6314: checking whether a magic number for user-defined format 1 was specified configure:6322: result: configure:6331: finding C compiler configure:6404: checking for gcc configure:6431: result: icc configure:6660: checking for C compiler version configure:6669: icc --version >&5 icc (ICC) 19.0.1.144 20181018 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:6680: $? = 0 configure:6669: icc -v >&5 icc version 19.0.1.144 (gcc version 8.3.0 compatibility) configure:6680: $? = 0 configure:6669: icc -V >&5 Intel(R) C Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 19.0.1.144 Build 20181018 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:6680: $? = 0 configure:6669: icc -qversion >&5 icc: command line warning #10006: ignoring unknown option '-qversion' icc: command line error: no files specified; for help type "icc -help" configure:6680: $? = 1 configure:6684: checking whether we are using the GNU C compiler configure:6712: result: yes configure:6721: checking whether icc accepts -g configure:6782: result: yes configure:6799: checking for icc option to accept ISO C89 configure:6875: result: none needed configure:6900: checking whether icc understands -c and -o together configure:6937: result: yes configure:6956: checking dependency style of icc configure:7067: result: gcc3 configure:7083: checking for an ANSI C-conforming const configure:7149: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:7149: $? = 0 configure:7156: result: yes configure:7187: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 conftest.c(23): catastrophic error: cannot open source file "curl/curl.h" #include "curl/curl.h" ^ compilation aborted for conftest.c (code 4) configure:7187: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | /* end confdefs.h. */ | #include "curl/curl.h" | int | main () | { | int x = CURLOPT_USERNAME; | ; | return 0; | } configure:7193: checking whether CURLOPT_USERNAME is defined configure:7195: result: no configure:7214: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 conftest.c(23): catastrophic error: cannot open source file "curl/curl.h" #include "curl/curl.h" ^ compilation aborted for conftest.c (code 4) configure:7214: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | /* end confdefs.h. */ | #include "curl/curl.h" | int | main () | { | int x = CURLOPT_PASSWORD; | ; | return 0; | } configure:7220: checking whether CURLOPT_PASSWORD is defined configure:7222: result: no configure:7241: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 conftest.c(23): catastrophic error: cannot open source file "curl/curl.h" #include "curl/curl.h" ^ compilation aborted for conftest.c (code 4) configure:7241: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | /* end confdefs.h. */ | #include "curl/curl.h" | int | main () | { | int x = CURLOPT_KEYPASSWD; | ; | return 0; | } configure:7247: checking whether CURLOPT_KEYPASSWD is defined configure:7249: result: no configure:7268: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 conftest.c(23): catastrophic error: cannot open source file "curl/curl.h" #include "curl/curl.h" ^ compilation aborted for conftest.c (code 4) configure:7268: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | /* end confdefs.h. */ | #include "curl/curl.h" | int | main () | { | int x = CURLINFO_RESPONSE_CODE; | ; | return 0; | } configure:7274: checking whether CURLINFO_RESPONSE_CODE is defined configure:7276: result: no configure:7295: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 conftest.c(23): catastrophic error: cannot open source file "curl/curl.h" #include "curl/curl.h" ^ compilation aborted for conftest.c (code 4) configure:7295: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | /* end confdefs.h. */ | #include "curl/curl.h" | int | main () | { | int x = CURLOPT_BUFFERSIZE; | ; | return 0; | } configure:7301: checking whether CURLOPT_BUFFERSIZE is defined configure:7303: result: no configure:7322: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 conftest.c(23): catastrophic error: cannot open source file "curl/curl.h" #include "curl/curl.h" ^ compilation aborted for conftest.c (code 4) configure:7322: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | /* end confdefs.h. */ | #include "curl/curl.h" | int | main () | { | int x = CURLOPT_TCP_KEEPALIVE; | ; | return 0; | } configure:7328: checking whether CURLOPT_TCP_KEEPALIVE is defined configure:7330: result: no configure:7341: setting up libtool configure:7390: checking how to print strings configure:7417: result: printf configure:7438: checking for a sed that does not truncate output configure:7502: result: /usr/bin/sed configure:7520: checking for grep that handles long lines and -e configure:7578: result: /usr/bin/grep configure:7583: checking for egrep configure:7645: result: /usr/bin/grep -E configure:7650: checking for fgrep configure:7712: result: /usr/bin/grep -F configure:7747: checking for ld used by icc configure:7814: result: /usr/bin/ld configure:7821: checking if the linker (/usr/bin/ld) is GNU ld configure:7836: result: yes configure:7848: checking for BSD- or MS-compatible name lister (nm) configure:7902: result: /usr/bin/nm -B configure:8032: checking the name lister (/usr/bin/nm -B) interface configure:8039: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:8042: /usr/bin/nm -B "conftest.o" configure:8045: output 0000000000000000 B some_variable configure:8052: result: BSD nm configure:8055: checking whether ln -s works configure:8059: result: yes configure:8067: checking the maximum length of command line arguments configure:8198: result: 3458764513820540925 configure:8246: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:8286: result: func_convert_file_noop configure:8293: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:8313: result: func_convert_file_noop configure:8320: checking for /usr/bin/ld option to reload object files configure:8327: result: -r configure:8401: checking for objdump configure:8417: found /usr/bin/objdump configure:8428: result: objdump configure:8460: checking how to recognize dependent libraries configure:8660: result: pass_all configure:8745: checking for dlltool configure:8775: result: no configure:8805: checking how to associate runtime and link libraries configure:8832: result: printf %s\n configure:8892: checking for ar configure:8908: found /usr/bin/ar configure:8919: result: ar configure:8956: checking for archiver @FILE support configure:8973: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:8973: $? = 0 configure:8976: ar cru libconftest.a @conftest.lst >&5 configure:8979: $? = 0 configure:8984: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:8987: $? = 1 configure:8999: result: @ configure:9057: checking for strip configure:9073: found /usr/bin/strip configure:9084: result: strip configure:9156: checking for ranlib configure:9172: found /usr/bin/ranlib configure:9183: result: ranlib configure:9285: checking command to parse /usr/bin/nm -B output from icc object configure:9438: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:9441: $? = 0 configure:9445: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:9448: $? = 0 configure:9514: icc -o conftest -DNDEBUG -DpgiFortran conftest.c conftstm.o >&5 configure:9517: $? = 0 configure:9555: result: ok configure:9602: checking for sysroot configure:9632: result: no configure:9639: checking for a working dd configure:9677: result: /usr/bin/dd configure:9681: checking how to truncate binary pipes configure:9696: result: /usr/bin/dd bs=4096 count=1 configure:9832: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:9835: $? = 0 configure:10025: checking for mt configure:10055: result: no configure:10075: checking if : is a manifest tool configure:10081: : '-?' configure:10089: result: no configure:10766: checking how to run the C preprocessor configure:10797: icc -E -DNDEBUG -DpgiFortran conftest.c configure:10797: $? = 0 configure:10811: icc -E -DNDEBUG -DpgiFortran conftest.c conftest.c(23): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:10811: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | /* end confdefs.h. */ | #include configure:10836: result: icc -E configure:10856: icc -E -DNDEBUG -DpgiFortran conftest.c configure:10856: $? = 0 configure:10870: icc -E -DNDEBUG -DpgiFortran conftest.c conftest.c(23): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:10870: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | /* end confdefs.h. */ | #include configure:10899: checking for ANSI C header files configure:10919: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:10919: $? = 0 configure:10992: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:10992: $? = 0 configure:10992: ./conftest configure:10992: $? = 0 configure:11003: result: yes configure:11016: checking for sys/types.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11016: checking for sys/stat.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11016: checking for stdlib.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11016: checking for string.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11016: checking for memory.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11016: checking for strings.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11016: checking for inttypes.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11016: checking for stdint.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11016: checking for unistd.h configure:11016: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11016: $? = 0 configure:11016: result: yes configure:11030: checking for dlfcn.h configure:11030: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:11030: $? = 0 configure:11030: result: yes configure:11286: checking for objdir configure:11301: result: .libs configure:11565: checking if icc supports -fno-rtti -fno-exceptions configure:11583: icc -c -DNDEBUG -DpgiFortran -fno-rtti -fno-exceptions conftest.c >&5 configure:11587: $? = 0 configure:11600: result: yes configure:11958: checking for icc option to produce PIC configure:11965: result: -fPIC -DPIC configure:11973: checking if icc PIC flag -fPIC -DPIC works configure:11991: icc -c -DNDEBUG -DpgiFortran -fPIC -DPIC -DPIC conftest.c >&5 configure:11995: $? = 0 configure:12008: result: yes configure:12037: checking if icc static flag -static works configure:12065: result: no configure:12080: checking if icc supports -c -o file.o configure:12101: icc -c -DNDEBUG -DpgiFortran -o out/conftest2.o conftest.c >&5 configure:12105: $? = 0 configure:12127: result: yes configure:12135: checking if icc supports -c -o file.o configure:12182: result: yes configure:12215: checking whether the icc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:13474: result: yes configure:13511: checking whether -lc should be explicitly linked in configure:13519: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:13522: $? = 0 configure:13537: icc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /usr/bin/grep -lc \>/dev/null 2\>\&1 configure:13540: $? = 0 configure:13554: result: no configure:13714: checking dynamic linker characteristics configure:14295: icc -o conftest -DNDEBUG -DpgiFortran -Wl,-rpath -Wl,/foo conftest.c >&5 configure:14295: $? = 0 configure:14532: result: GNU/Linux ld.so configure:14654: checking how to hardcode library paths into programs configure:14679: result: immediate configure:15227: checking whether stripping libraries is possible configure:15232: result: yes configure:15267: checking if libtool supports shared libraries configure:15269: result: yes configure:15272: checking whether to build shared libraries configure:15297: result: yes configure:15300: checking whether to build static libraries configure:15304: result: yes configure:15342: finding other utilities configure:15350: checking for m4 configure:15366: found /usr/bin/m4 configure:15377: result: m4 configure:15397: checking for doxygen configure:15413: found /usr/bin/doxygen configure:15424: result: doxygen configure:15446: checking for dot configure:15462: found /usr/bin/dot configure:15473: result: dot configure:15518: checking for special C compiler options needed for large files configure:15563: result: no configure:15569: checking for _FILE_OFFSET_BITS value needed for large files configure:15594: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15594: $? = 0 configure:15626: result: no configure:15712: displaying some results configure:15718: checking CPPFLAGS configure:15720: result: -DNDEBUG -DpgiFortran configure:15722: checking CC CFLAGS configure:15724: result: icc configure:15727: checking type icc configure:15729: result: icc is /home/aqf/intel/compilers_and_libraries_2019.1.144/linux/bin/intel64/icc configure:15732: checking CXX configure:15735: result: icpc configure:15737: checking CXXFLAGS configure:15739: result: configure:15742: checking type icpc configure:15744: result: icpc is /home/aqf/intel/compilers_and_libraries_2019.1.144/linux/bin/intel64/icpc configure:15751: checking FC configure:15754: result: ifort configure:15756: checking FFLAGS configure:15758: result: -O2 -mp -recursive configure:15761: checking type ifort configure:15763: result: ifort is /home/aqf/intel/compilers_and_libraries_2019.1.144/linux/bin/intel64/ifort configure:15770: checking F90 configure:15773: result: ifort configure:15775: checking FCFLAGS configure:15777: result: configure:15780: checking type ifort configure:15782: result: ifort is /home/aqf/intel/compilers_and_libraries_2019.1.144/linux/bin/intel64/ifort configure:15789: checking AR configure:15792: result: ar configure:15794: checking AR_FLAGS configure:15796: result: cru configure:15799: checking type ar configure:15801: result: ar is /usr/bin/ar configure:15808: checking NM configure:15811: result: /usr/bin/nm -B configure:15813: checking NMFLAGS configure:15815: result: configure:15830: checking types, headers, and functions configure:15835: checking sys/param.h usability configure:15835: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15835: $? = 0 configure:15835: result: yes configure:15835: checking sys/param.h presence configure:15835: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15835: $? = 0 configure:15835: result: yes configure:15835: checking for sys/param.h configure:15835: result: yes configure:15847: checking libgen.h usability configure:15847: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15847: $? = 0 configure:15847: result: yes configure:15847: checking libgen.h presence configure:15847: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15847: $? = 0 configure:15847: result: yes configure:15847: checking for libgen.h configure:15847: result: yes configure:15858: checking for ANSI C header files configure:15962: result: yes configure:15973: checking locale.h usability configure:15973: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking locale.h presence configure:15973: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking for locale.h configure:15973: result: yes configure:15973: checking stdio.h usability configure:15973: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking stdio.h presence configure:15973: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking for stdio.h configure:15973: result: yes configure:15973: checking stdarg.h usability configure:15973: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking stdarg.h presence configure:15973: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking for stdarg.h configure:15973: result: yes configure:15973: checking fcntl.h usability configure:15973: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking fcntl.h presence configure:15973: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking for fcntl.h configure:15973: result: yes configure:15973: checking malloc.h usability configure:15973: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking malloc.h presence configure:15973: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking for malloc.h configure:15973: result: yes configure:15973: checking for stdlib.h configure:15973: result: yes configure:15973: checking for string.h configure:15973: result: yes configure:15973: checking for strings.h configure:15973: result: yes configure:15973: checking for unistd.h configure:15973: result: yes configure:15973: checking for sys/stat.h configure:15973: result: yes configure:15973: checking getopt.h usability configure:15973: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking getopt.h presence configure:15973: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking for getopt.h configure:15973: result: yes configure:15973: checking sys/time.h usability configure:15973: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking sys/time.h presence configure:15973: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15973: $? = 0 configure:15973: result: yes configure:15973: checking for sys/time.h configure:15973: result: yes configure:15973: checking for sys/types.h configure:15973: result: yes configure:15989: checking sys/resource.h usability configure:15989: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:15989: $? = 0 configure:15989: result: yes configure:15989: checking sys/resource.h presence configure:15989: icc -E -DNDEBUG -DpgiFortran conftest.c configure:15989: $? = 0 configure:15989: result: yes configure:15989: checking for sys/resource.h configure:15989: result: yes configure:16004: checking ftw.h usability configure:16004: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:16004: $? = 0 configure:16004: result: yes configure:16004: checking ftw.h presence configure:16004: icc -E -DNDEBUG -DpgiFortran conftest.c configure:16004: $? = 0 configure:16004: result: yes configure:16004: checking for ftw.h configure:16004: result: yes configure:16022: checking for strlcat configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 /tmp/iccWmggUY.o: In function `main': conftest.c:(.text+0x2b): undefined reference to `strlcat' configure:16022: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_LIBGEN_H 1 | #define STDC_HEADERS 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_FTW_H 1 | /* end confdefs.h. */ | /* Define strlcat to an innocuous variant, in case declares strlcat. | For example, HP-UX 11i declares gettimeofday. */ | #define strlcat innocuous_strlcat | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char strlcat (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef strlcat | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char strlcat (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_strlcat || defined __stub___strlcat | choke me | #endif | | int | main () | { | return strlcat (); | ; | return 0; | } configure:16022: result: no configure:16022: checking for snprintf configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for strdup configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for strtoll configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for strtoull configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for mkstemp configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for mktemp configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 /tmp/iccfYB9D0.o: In function `main': conftest.c:(.text+0x2b): warning: the use of `mktemp' is dangerous, better use `mkstemp' configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for random configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for getrlimit configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for gettimeofday configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for fsync configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16022: $? = 0 configure:16022: result: yes configure:16022: checking for MPI_Comm_f2c configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 /tmp/icc37cc3Q.o: In function `main': conftest.c:(.text+0x2d): undefined reference to `MPI_Comm_f2c' configure:16022: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_LIBGEN_H 1 | #define STDC_HEADERS 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_FTW_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_MKSTEMP 1 | #define HAVE_MKTEMP 1 | #define HAVE_RANDOM 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | /* end confdefs.h. */ | /* Define MPI_Comm_f2c to an innocuous variant, in case declares MPI_Comm_f2c. | For example, HP-UX 11i declares gettimeofday. */ | #define MPI_Comm_f2c innocuous_MPI_Comm_f2c | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char MPI_Comm_f2c (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef MPI_Comm_f2c | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char MPI_Comm_f2c (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_MPI_Comm_f2c || defined __stub___MPI_Comm_f2c | choke me | #endif | | int | main () | { | return MPI_Comm_f2c (); | ; | return 0; | } configure:16022: result: no configure:16022: checking for MPI_Info_f2c configure:16022: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 /tmp/icc9egN22.o: In function `main': conftest.c:(.text+0x2d): undefined reference to `MPI_Info_f2c' configure:16022: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf-c" | #define PACKAGE_VERSION "4.7.0" | #define PACKAGE_STRING "netCDF 4.7.0" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf-c" | #define VERSION "4.7.0" | #define NCIO_MINBLOCKSIZE 256 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" | #define USE_NETCDF_2 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define NCPROPERTIES_EXTRA "" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_LIBGEN_H 1 | #define STDC_HEADERS 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_FTW_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_MKSTEMP 1 | #define HAVE_MKTEMP 1 | #define HAVE_RANDOM 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | /* end confdefs.h. */ | /* Define MPI_Info_f2c to an innocuous variant, in case declares MPI_Info_f2c. | For example, HP-UX 11i declares gettimeofday. */ | #define MPI_Info_f2c innocuous_MPI_Info_f2c | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char MPI_Info_f2c (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef MPI_Info_f2c | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char MPI_Info_f2c (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_MPI_Info_f2c || defined __stub___MPI_Info_f2c | choke me | #endif | | int | main () | { | return MPI_Info_f2c (); | ; | return 0; | } configure:16022: result: no configure:16035: WARNING: netcdf-4 not enabled; disabling DAP4 configure:16050: checking for memmove configure:16050: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16050: $? = 0 configure:16050: result: yes configure:16050: checking for getpagesize configure:16050: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16050: $? = 0 configure:16050: result: yes configure:16050: checking for sysconf configure:16050: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16050: $? = 0 configure:16050: result: yes configure:16061: checking whether mmap is enabled for in-memory files configure:16069: result: no configure:16076: checking for mmap configure:16076: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16076: $? = 0 configure:16076: result: yes configure:16089: checking for mremap configure:16089: icc -o conftest -DNDEBUG -DpgiFortran conftest.c >&5 configure:16089: $? = 0 configure:16089: result: yes configure:16113: icc -c -DNDEBUG -DpgiFortran conftest.c >&5 configure:16113: $? = 0 configure:16119: checking whether MAP_ANONYMOUS is defined configure:16121: result: yes configure:16139: checking whether byte range support is enabled configure:16147: result: no configure:16151: error: curl required for byte range support. Install curl or build without --enable-byterange. ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_env_CC_set=set ac_cv_env_CC_value=icc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value='-DNDEBUG -DpgiFortran' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_MPI_Comm_f2c=no ac_cv_func_MPI_Info_f2c=no ac_cv_func_fsync=yes ac_cv_func_getpagesize=yes ac_cv_func_getrlimit=yes ac_cv_func_gettimeofday=yes ac_cv_func_memmove=yes ac_cv_func_mkstemp=yes ac_cv_func_mktemp=yes ac_cv_func_mmap=yes ac_cv_func_mremap=yes ac_cv_func_random=yes ac_cv_func_snprintf=yes ac_cv_func_strdup=yes ac_cv_func_strlcat=no ac_cv_func_strtoll=yes ac_cv_func_strtoull=yes ac_cv_func_sysconf=yes ac_cv_header_dlfcn_h=yes ac_cv_header_fcntl_h=yes ac_cv_header_ftw_h=yes ac_cv_header_getopt_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_libgen_h=yes ac_cv_header_locale_h=yes ac_cv_header_malloc_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdarg_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_param_h=yes ac_cv_header_sys_resource_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_curl_curl_easy_setopt=no ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_SED=/usr/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/usr/bin/dd ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='icc -E' ac_cv_prog_DOT=dot ac_cv_prog_DOXYGEN=doxygen ac_cv_prog_NC_M4=m4 ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=icc ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_make_make_set=yes ac_cv_sys_file_offset_bits=no ac_cv_sys_largefile_CC=no ac_cv_target=x86_64-pc-linux-gnu am_cv_CC_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_rtti_exceptions=yes lt_cv_prog_compiler_static_works=no lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=3458764513820540925 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## $(foreach tool, $(valgrind_enabled_tools), check-valgrind-$(tool)) LOG_COMPILER="$$(VALGRIND_LOG_COMPILER)" \ LOG_FLAGS="$$(valgrind_$(1)_flags)" \ TESTS_ENVIRONMENT="$$(VALGRIND_TESTS_ENVIRONMENT)" \ TEST_SUITE_LOG=test-suite-$(1).log $$(valgrind_v_use)$$(MAKE) check-TESTS \ $(AM_V_at)$(MAKE) $(AM_MAKEFLAGS) -k \ $(TESTS_ENVIRONMENT) \ $(VALGRIND) $(VALGRIND_SUPPRESSIONS) --error-exitcode=1 $(VALGRIND_FLAGS) $(valgrind_lt) \ @echo "Need to reconfigure with --enable-valgrind" @echo "Need to reconfigure with --enable-valgrind" @echo "Need to reconfigure with --enable-valgrind-$(1)" G_DEBUG=fatal-warnings,fatal-criticals,gc-friendly G_SLICE=always-malloc,debug-blocks \ env VALGRIND=$(VALGRIND) \ # # (Default: --num-callers=30) # files to load. (Default: empty) # memcheck, helgrind, drd, sgcheck). (Default: various) # - VALGRIND_$toolname_FLAGS: Flags to pass to Valgrind $toolname (one of: # - VALGRIND_FLAGS: General flags to pass to all Valgrind tools. # - VALGRIND_SUPPRESSIONS_FILES: Space-separated list of Valgrind suppressions # Internal use # Optional variables # Optional: # Support running with and without libtool. # Use recursive makes in order to ignore errors during check # Valgrind check # Valgrind running $(foreach tool,$(valgrind_tools),$(eval $(call valgrind_tool_rule,$(tool)))) ' .PHONY: check-valgrind $(add-prefix check-valgrind-,$(valgrind_tools)) ACLOCAL='${SHELL} /home/ytang/jjoshi/softwares/cmaq_libsicc19.0/netcdf-c-4.7.0/missing aclocal-1.16' ALLOCA='' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_CFLAGS='' AM_CPPFLAGS='' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_DISTCHECK_CONFIGURE_FLAGS += --disable-valgrind AM_DISTCHECK_CONFIGURE_FLAGS ?= AM_LDFLAGS='' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /home/ytang/jjoshi/softwares/cmaq_libsicc19.0/netcdf-c-4.7.0/missing autoconf' AUTOHEADER='${SHELL} /home/ytang/jjoshi/softwares/cmaq_libsicc19.0/netcdf-c-4.7.0/missing autoheader' AUTOMAKE='${SHELL} /home/ytang/jjoshi/softwares/cmaq_libsicc19.0/netcdf-c-4.7.0/missing automake-1.16' AWK='gawk' BINFILE_NAME='' BUILD_BENCHMARKS_FALSE='' BUILD_BENCHMARKS_TRUE='#' BUILD_DAP_FALSE='' BUILD_DAP_TRUE='' BUILD_DOCS_FALSE='' BUILD_DOCS_TRUE='#' BUILD_EXAMPLES_FALSE='#' BUILD_EXAMPLES_TRUE='' BUILD_FORTRAN_FALSE='' BUILD_FORTRAN_TRUE='' BUILD_INTERNAL_DOCS='no' BUILD_MMAP_FALSE='' BUILD_MMAP_TRUE='' BUILD_PARALLEL_FALSE='' BUILD_PARALLEL_TRUE='' BUILD_TESTSETS_FALSE='#' BUILD_TESTSETS_TRUE='' BUILD_UTILITIES_FALSE='#' BUILD_UTILITIES_TRUE='' BUILD_V2_FALSE='#' BUILD_V2_TRUE='' CC='icc' CCDEPMODE='depmode=gcc3' CC_VERSION='/home/aqf/intel/compilers_and_libraries_2019.1.144/linux/bin/intel64/icc' CFLAGS='' CONFIG_DATE='Mon Sep 16 20:06:24 UTC 2019' CPP='icc -E' CPPFLAGS='-DNDEBUG -DpgiFortran' CROSS_COMPILING_FALSE='' CROSS_COMPILING_TRUE='' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DLLTOOL='false' DOT='dot' DOXYGEN='doxygen' DOXYGEN_BUILD_RELEASE_DOCS_FALSE='' DOXYGEN_BUILD_RELEASE_DOCS_TRUE='#' DOXYGEN_CSS_FILE='' DOXYGEN_HEADER_FILE='' DOXYGEN_SEARCHENGINE='YES' DOXYGEN_SERVER_BASED_SEARCH='NO' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' ENABLED_DOC_SECTIONS='' ENABLE_BYTERANGE_FALSE='' ENABLE_BYTERANGE_TRUE='' ENABLE_CDF5_FALSE='' ENABLE_CDF5_TRUE='' ENABLE_DAP4_FALSE='' ENABLE_DAP4_TRUE='' ENABLE_DAP_AUTH_TESTS_FALSE='' ENABLE_DAP_AUTH_TESTS_TRUE='' ENABLE_DAP_FALSE='' ENABLE_DAP_LONG_TESTS_FALSE='' ENABLE_DAP_LONG_TESTS_TRUE='' ENABLE_DAP_REMOTE_TESTS_FALSE='' ENABLE_DAP_REMOTE_TESTS_TRUE='' ENABLE_DAP_TRUE='' ENABLE_FILTER_TESTING_FALSE='' ENABLE_FILTER_TESTING_TRUE='' ENABLE_METADATA_PERF_FALSE='' ENABLE_METADATA_PERF_TRUE='' ENABLE_PARALLEL_FALSE='' ENABLE_PARALLEL_TRUE='' ENABLE_VALGRIND_FALSE='' ENABLE_VALGRIND_TRUE='#' ENABLE_VALGRIND_drd='no' ENABLE_VALGRIND_helgrind='no' ENABLE_VALGRIND_memcheck='no' ENABLE_VALGRIND_sgcheck='no' EXEEXT='' FGREP='/usr/bin/grep -F' GREP='/usr/bin/grep' HAS_BYTERANGE='' HAS_CDF5='' HAS_DAP2='' HAS_DAP4='' HAS_DAP='' HAS_DISKLESS='' HAS_ERANGE_FILL='' HAS_HDF4='' HAS_HDF5='' HAS_JNA='' HAS_LOGGING='' HAS_MMAP='' HAS_NC2='' HAS_NC4='' HAS_PARALLEL4='' HAS_PARALLEL='' HAS_PNETCDF='' HAS_SZLIB='' HAVE_DOT='NO' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' INTERNAL_OCLIB_FALSE='#' INTERNAL_OCLIB_TRUE='' ISCMAKE='' ISCYGWIN_FALSE='' ISCYGWIN_TRUE='' LARGE_FILE_TESTS_FALSE='' LARGE_FILE_TESTS_TRUE='#' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='' LIBOBJS='' LIBS='' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' M4FLAGS='' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINFO='${SHELL} /home/ytang/jjoshi/softwares/cmaq_libsicc19.0/netcdf-c-4.7.0/missing makeinfo' MANIFEST_TOOL=':' MKDIR_P='/usr/bin/mkdir -p' MOSTLYCLEANFILES += $(valgrind_log_files) MOSTLYCLEANFILES ?= MPIEXEC='mpiexec' MSVC='' NC_ENABLE_DOXYGEN_PDF_OUTPUT='' NC_ENABLE_DOXYGEN_PDF_OUTPUT_FALSE='' NC_ENABLE_DOXYGEN_PDF_OUTPUT_TRUE='#' NC_HAS_BYTERANGE='' NC_HAS_CDF5='' NC_HAS_DAP2='' NC_HAS_DAP4='' NC_HAS_DISKLESS='' NC_HAS_ERANGE_FILL='' NC_HAS_HDF4='' NC_HAS_HDF5='' NC_HAS_JNA='' NC_HAS_MMAP='' NC_HAS_NC2='' NC_HAS_NC4='' NC_HAS_PARALLEL4='' NC_HAS_PARALLEL='' NC_HAS_PNETCDF='' NC_HAS_SZIP='' NC_LIBS='' NC_M4='m4' NC_RELAX_COORD_BOUND='' NC_VERSION='' NC_VERSION_MAJOR='4' NC_VERSION_MINOR='7' NC_VERSION_NOTE='' NC_VERSION_PATCH='0' NM='/usr/bin/nm -B' NMEDIT='' NOUNDEFINED='' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='netcdf-c' PACKAGE_BUGREPORT='support-netcdf@unidata.ucar.edu' PACKAGE_NAME='netCDF' PACKAGE_STRING='netCDF 4.7.0' PACKAGE_TARNAME='netcdf-c' PACKAGE_URL='' PACKAGE_VERSION='4.7.0' PATH_SEPARATOR=':' RANLIB='ranlib' RELAX_COORD_BOUND='' SED='/usr/bin/sed' SET_MAKE='' SHELL='/bin/sh' SHOW_DOXYGEN_TAG_LIST='no' SHOW_DOXYGEN_TAG_LIST_FALSE='' SHOW_DOXYGEN_TAG_LIST_TRUE='#' STRIP='strip' TEST_PARALLEL4_FALSE='' TEST_PARALLEL4_TRUE='' USE_DAP_FALSE='' USE_DAP_TRUE='' USE_DISPATCH_FALSE='' USE_DISPATCH_TRUE='' USE_FFIO_FALSE='' USE_FFIO_TRUE='#' USE_HDF4_FALSE='' USE_HDF4_FILE_TESTS_FALSE='' USE_HDF4_FILE_TESTS_TRUE='' USE_HDF4_TRUE='' USE_HDF5_FALSE='' USE_HDF5_TRUE='' USE_LOGGING_FALSE='' USE_LOGGING_TRUE='' USE_NETCDF4_FALSE='' USE_NETCDF4_TRUE='' USE_PNETCDF_DIR_FALSE='' USE_PNETCDF_DIR_TRUE='' USE_PNETCDF_FALSE='' USE_PNETCDF_TRUE='' USE_RENAMEV3_FALSE='' USE_RENAMEV3_TRUE='' USE_STDIO_FALSE='' USE_STDIO_TRUE='#' USE_STRICT_NULL_BYTE_HEADER_PADDING_FALSE='' USE_STRICT_NULL_BYTE_HEADER_PADDING_TRUE='#' USE_SZIP_FALSE='' USE_SZIP_TRUE='' VALGRIND='' VALGRIND_CHECK_RULES=' VALGRIND_ENABLED='no' VALGRIND_ENABLED_FALSE='' VALGRIND_ENABLED_TRUE='#' VALGRIND_FLAGS ?= --num-callers=30 VALGRIND_LOG_COMPILER = \ VALGRIND_SUPPRESSIONS ?= $(addprefix --suppressions=,$(VALGRIND_SUPPRESSIONS_FILES)) VALGRIND_TESTS_ENVIRONMENT = \ VALGRIND_drd_FLAGS ?= VALGRIND_helgrind_FLAGS ?= --history-level=approx VALGRIND_memcheck_FLAGS ?= --leak-check=full --show-reachable=no VALGRIND_sgcheck_FLAGS ?= VERSION='4.7.0' ac_ct_AR='ar' ac_ct_CC='icc' ac_ct_DUMPBIN='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' check-valgrind-$(1)-am: check-valgrind-am: datadir='${datarootdir}' datarootdir='${prefix}/share' define valgrind_tool_rule docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' else else else else ifeq ($$(VALGRIND_ENABLED),yes) enable_shared='yes' enable_static='yes' endef endif endif endif endif exec_prefix='NONE' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' ifeq ($$(VALGRIND_ENABLED)-$$(ENABLE_VALGRIND_$(1)),yes-yes) ifeq ($(VALGRIND_ENABLED),yes) ifneq ($$(TESTS),) ifneq ($(LIBTOOL),) includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home/ytang/jjoshi/softwares/cmaq_libsicc19.0/netcdf-c-4.7.0/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/home/ytang/jjoshi/softwares/cmaq_libsicc19.0/netcdf-c-4.7.0-icc19.0' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target='x86_64-pc-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='pc' valgrind_drd_flags = --tool=drd $(VALGRIND_drd_FLAGS) valgrind_enabled_tools='' valgrind_helgrind_flags = --tool=helgrind $(VALGRIND_helgrind_FLAGS) valgrind_log_files = $(addprefix test-suite-,$(addsuffix .log,$(valgrind_tools))) valgrind_lt = valgrind_lt = $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=execute valgrind_memcheck_flags = --tool=memcheck $(VALGRIND_memcheck_FLAGS) valgrind_quiet = $(valgrind_quiet_$(V)) valgrind_quiet_ = $(valgrind_quiet_$(AM_DEFAULT_VERBOSITY)) valgrind_quiet_0 = --quiet valgrind_sgcheck_flags = --tool=exp-sgcheck $(VALGRIND_sgcheck_FLAGS) valgrind_tools='memcheck helgrind drd sgcheck' valgrind_v_use = $(valgrind_v_use_$(V)) valgrind_v_use_ = $(valgrind_v_use_$(AM_DEFAULT_VERBOSITY)) valgrind_v_use_0 = @echo " USE " $(patsubst check-valgrind-%-am,%,$@):; ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "netCDF" #define PACKAGE_TARNAME "netcdf-c" #define PACKAGE_VERSION "4.7.0" #define PACKAGE_STRING "netCDF 4.7.0" #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" #define PACKAGE_URL "" #define PACKAGE "netcdf-c" #define VERSION "4.7.0" #define NCIO_MINBLOCKSIZE 256 #define DEFAULT_CHUNK_SIZE 4194304 #define MAX_DEFAULT_CACHE_SIZE 67108864 #define DEFAULT_CHUNKS_IN_CACHE 10 #define CHUNK_CACHE_SIZE 4194304 #define CHUNK_CACHE_NELEMS 1009 #define CHUNK_CACHE_PREEMPTION 0.75 #define REMOTETESTSERVERS "149.165.169.123:8080,remotetest.unidata.ucar.edu" #define USE_NETCDF_2 1 #define USE_EXTREME_NUMBERS 1 #define TEMP_LARGE "." #define NCPROPERTIES_EXTRA "" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_SYS_PARAM_H 1 #define HAVE_LIBGEN_H 1 #define STDC_HEADERS 1 #define HAVE_LOCALE_H 1 #define HAVE_STDIO_H 1 #define HAVE_STDARG_H 1 #define HAVE_FCNTL_H 1 #define HAVE_MALLOC_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_STRINGS_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_GETOPT_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_RESOURCE_H 1 #define HAVE_FTW_H 1 #define HAVE_SNPRINTF 1 #define HAVE_STRDUP 1 #define HAVE_STRTOLL 1 #define HAVE_STRTOULL 1 #define HAVE_MKSTEMP 1 #define HAVE_MKTEMP 1 #define HAVE_RANDOM 1 #define HAVE_GETRLIMIT 1 #define HAVE_GETTIMEOFDAY 1 #define HAVE_FSYNC 1 #define HAVE_MEMMOVE 1 #define HAVE_GETPAGESIZE 1 #define HAVE_SYSCONF 1 #define HAVE_MMAP 1 #define HAVE_MREMAP 1 configure: exit 1