source .cshrc file ... ~/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1 ~/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/PREP/bcon/scripts Compiler is set to gcc ~/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/PREP/bcon/scripts Input data path, CMAQ_DATA set to /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/data model BCON_v531.exe; repo /rds/projects/2018/caix-wm-air/mazzeoa/pgm/CMAQ/v5.3.1/CMAQ_REPO/PREP/bcon/src; lib_base /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/lib/x86_64/gcc; lib_1 ioapi/lib; lib_2 ioapi/include_files; lib_4 ioapi/lib; cpp_flags ""; f_compiler mpifort; fstd "-O3 -funroll-loops -finit-character=32 -Wtabs -Wsurprising -march=native -ftree-vectorize -ftree-loop-if-convert -finline-limit=512"; dbg "-Wall -O0 -g -fcheck=all -ffpe-trap=invalid,zero,overflow -fbacktrace"; f_flags "-ffixed-form -ffixed-line-length-132 -funroll-loops -finit-character=32"; f90_flags "-ffree-form -ffree-line-length-none -funroll-loops -finit-character=32"; link_flags "-fopenmp"; ioapi "-lioapi"; netcdf "-lnetcdf -fopenmp"; netcdff "-lnetcdff"; // project repository location: /rds/projects/2018/caix-wm-air/mazzeoa/pgm/CMAQ/v5.3.1/CMAQ_REPO/PREP/bcon/src // required common Module common; // options are m3conc Module m3conc; // options are profile Module profile; setenv GRID_NAME WMA27KMS setenv GRIDDESC /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/MCIP_OUT/WMA27KMS_monLoop/GRIDDESC setenv IOAPI_ISPH 20 setenv IOAPI_LOG_WRITE F setenv IOAPI_OFFSET_64 YES setenv EXECUTION_ID BCON_v531.exe setenv BCON_TYPE ` echo $BCTYPE | tr "[A-Z]" "[a-z]" ` echo regrid tr [A-Z] [a-z] set OUTDIR = /rds/homes/m/mazzeoa/RDS/WM-Air-Storage/CMAQ/BCON_OUT_NESTED/WMA27KMS set DATE = 2016-01-16 set YYYYJJJ = `date -ud "${DATE}" +%Y%j` date -ud 2016-01-16 +%Y%j set YYMMDD = `date -ud "${DATE}" +%y%m%d` date -ud 2016-01-16 +%y%m%d set YYYYMMDD = `date -ud "${DATE}" +%Y%m%d` date -ud 2016-01-16 +%Y%m%d if ( regrid == regrid ) then setenv CTM_CONC_1 /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/HEMI_OUT/CCTM_CONC_v53beta2_gcc_HEMIS_cb05e51_ae6_aq_kmtbr_m3dry_2016_quarterly_av_genspec.nc setenv MET_CRO_3D_CRS /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/HEMI_OUT/CCTM_CONC_v53beta2_gcc_HEMIS_cb05e51_ae6_aq_kmtbr_m3dry_2016_quarterly_av_genspec.nc setenv MET_BDY_3D_FIN /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/MCIP_OUT/WMA27KMS_monLoop/METBDY3D_160116.nc setenv BNDY_CONC_1 /rds/homes/m/mazzeoa/RDS/WM-Air-Storage/CMAQ/BCON_OUT_NESTED/WMA27KMS/BCON_v531_WMA27KMS_regrid_2016 -v endif if ( regrid == profile ) then if ( ! -d /rds/homes/m/mazzeoa/RDS/WM-Air-Storage/CMAQ/BCON_OUT_NESTED/WMA27KMS ) mkdir -p /rds/homes/m/mazzeoa/RDS/WM-Air-Storage/CMAQ/BCON_OUT_NESTED/WMA27KMS ls -l /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/PREP/bcon/scripts/BLD_BCON_v531_gcc/BCON_v531.exe -rwx------ 1 mazzeoa gITS_BEAR_2018-caix-wm-air 1730240 Jul 7 2020 /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/PREP/bcon/scripts/BLD_BCON_v531_gcc/BCON_v531.exe size /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/PREP/bcon/scripts/BLD_BCON_v531_gcc/BCON_v531.exe text data bss dec hex filename 1669774 5104 10127988 11802866 b418f2 /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/PREP/bcon/scripts/BLD_BCON_v531_gcc/BCON_v531.exe unlimit limit cputime unlimited filesize unlimited datasize unlimited stacksize unlimited coredumpsize unlimited memoryuse unlimited vmemoryuse unlimited descriptors 4096 memorylocked unlimited maxproc 252852 maxlocks unlimited maxsignal 252852 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/pgm/CMAQ/v5.3.1/PREP/bcon/scripts/BLD_BCON_v531_gcc/BCON_v531.exe This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2013 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2019 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 120 2019-06-21 14:18:20Z coats $ Version with PARMS3.EXT/PARAMETER::MXVARS3= 2048 netCDF version 4.6.2 of Aug 2 2019 14:25:57 $ This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2013 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2019 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 120 2019-06-21 14:18:20Z coats $ netCDF version 4.6.2 of Aug 2 2019 14:25:57 $ EXECUTION_ID: BCON_v531.exe Value for BCON_TYPE: 'regrid' Value for BCON_TYPE: 'regrid' Value for GRID_NAME: 'WMA27KMS' Value for GRID_NAME: 'WMA27KMS' File "GRIDDESC" opened for input on unit: 99 /rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/MCIP_OUT/WMA27KMS_monLoop/GRIDDESC Value for IOAPI_CHECK_HEADERS not defined;returning default: FALSE "MET_BDY_3D_FIN" opened as OLD:READ-ONLY File name "/rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/MCIP_OUT/WMA27KMS_monLoop/METBDY3D_160116.nc" File type BNDARY3 Execution ID "mcip" Grid name "METCRO_WMA27KMS_" Dimensions: 96 rows, 99 cols, 29 lays, 14 vbles, 1 cells thick NetCDF ID: 65536 opened as READONLY Starting date and time 2016016:000000 (0:00:00 Jan. 16, 2016) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 ############################################################################### # Input section ############################################################################### Boundary Concentrations from a CMAQ CTM concentration file. Value for SDATE not defined; returning default: 0 Value for STIME not defined; returning default: 0 Value for RUNLEN not defined; returning default: 0 Input Models3 CTM file names: Value for CTM_CONC_1: '/rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/HEMI_OUT/CCTM_CONC_v53beta2_gcc_HEMIS_cb05e51_ae6_aq_kmtbr_m3dry_2016_quarterly_av_genspec.nc' Value for CTM_CONC_1: '/rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/HEMI_OUT/CCTM_CONC_v53beta2_gcc_HEMIS_cb05e51_ae6_aq_kmtbr_m3dry_2016_quarterly_av_genspec.nc' Value for CTM_CONC_2 not defined; returning defaultval ': ' ' Value for CTM_CONC_2 not defined; returning defaultval ': ' ' Value for CTM_CONC_3 not defined; returning defaultval ': ' ' Value for CTM_CONC_3 not defined; returning defaultval ': ' ' "CTM_CONC_1" opened as OLD:READ-ONLY File name "/rds/homes/m/mazzeoa/RDS/mazzeoa-WM-Air/outputs/CMAQ2016/HEMI_OUT/CCTM_CONC_v53beta2_gcc_HEMIS_cb05e51_ae6_aq_kmtbr_m3dry_2016_quarterly_av_genspec.nc" File type GRDDED3 Execution ID "????????????????" Grid name "WRF_CMAQ_2WAY" Dimensions: 187 rows, 187 cols, 44 lays, 168 vbles NetCDF ID: 131072 opened as READONLY Starting date and time 2015289:120000 (12:00:00 Oct. 16, 2015) Timestep 21960000 (2196:00:00 hh:mm:ss) Maximum current record number 6 Input SDATE equals zero; SDATE reset to MET_BDY_3D_FIN file start date Input STIME equals zero; STIME reset to MET_BDY_3D_FIN file start time Input RUNLEN not set or equal to zero. Resetting RUNLEN to correspond to MET_BDY_3D_FIN file ending date & time. NCOLS_IN: 187 NROWS_IN: 187 NLAYS_IN: 44 NSPCS_IN: 168 NBNDY: 394 NLAYS: 29 Value for IOAPI_ISPH: '20' Value for IOAPI_ISPH: '20' INITSPHERES: input sphere Normal Sphere (MM5 & WRF-ARW) R=6370000 ############################################################################### # Vertical Interpolation Section ############################################################################### The COORD.EXT and CTM vertical grid types are the same, but the resolution is different. Vertical interpolation using VGLVS (listed below). Vertical grid type: WRF mass-core sigma Vertical layer surface values (VGLVS) : K COORD.EXT Input CTM 1 1.000 1.000 2 0.998 0.998 3 0.993 0.995 4 0.986 0.991 5 0.978 0.988 6 0.969 0.983 7 0.959 0.978 8 0.949 0.972 9 0.936 0.966 10 0.923 0.958 11 0.908 0.949 12 0.892 0.939 13 0.874 0.928 14 0.854 0.914 15 0.831 0.899 16 0.807 0.881 17 0.779 0.861 18 0.749 0.837 19 0.716 0.810 20 0.679 0.780 21 0.637 0.744 22 0.592 0.707 23 0.542 0.669 24 0.486 0.632 25 0.424 0.595 26 0.356 0.557 27 0.280 0.520 28 0.196 0.483 29 0.103 0.445 30 0.000 0.408 31 0.371 32 0.335 33 0.301 34 0.269 35 0.238 36 0.209 37 0.181 38 0.154 39 0.129 40 0.105 41 0.082 42 0.060 43 0.039 44 0.019 45 0.000 Vertical interpolation method: Linear ############################################################################### # Output File Section ############################################################################### Value for EXECUTION_ID: 'BCON_v531.exe' Value for EXECUTION_ID: 'BCON_v531.exe' Total number of ouput files created: 1 Value for BNDY_CONC_1: '/rds/homes/m/mazzeoa/RDS/WM-Air-Storage/CMAQ/BCON_OUT_NESTED/WMA27KMS/BCON_v531_WMA27KMS_regrid_2016 -v' Value for BNDY_CONC_1: '/rds/homes/m/mazzeoa/RDS/WM-Air-Storage/CMAQ/BCON_OUT_NESTED/WMA27KMS/BCON_v531_WMA27KMS_regrid_2016 -v' IO/API Header data for BC file 1: BNDY_CONC_1 EXEC_ID: BCON_v531.exe FTYPE = 2 SDATE = 2016016 STIME = 0 TSTEP = 10000 NCOLS = 99 NROWS = 96 NLAYS = 29 NTHIK = 1 NVARS = 168 GDTYP = 2 P_ALP = 4.00000E+01 P_BET = 7.00000E+01 P_GAM = -1.00000E+00 XCENT = -1.00000E+00 YCENT = 5.35000E+01 XORIG = -1.33650E+06 YORIG = -1.29600E+06 XCELL = 2.70000E+04 YCELL = 2.70000E+04 VGTYP = 7 VGTOP = 5.00000E+03 GDNAM = WMA27KMS VGLVS = 1.00000E+00 9.97500E-01 9.93454E-01 9.86205E-01 9.78177E-01 9.69287E-01 9.59442E-01 9.48539E-01 9.36464E-01 9.23093E-01 9.08285E-01 8.91886E-01 8.73726E-01 8.53615E-01 8.31343E-01 8.06679E-01 7.79365E-01 7.49116E-01 7.15618E-01 6.78522E-01 6.37440E-01 5.91944E-01 5.41562E-01 4.85766E-01 4.23977E-01 3.55550E-01 2.79772E-01 1.95853E-01 1.02918E-01 0.00000E+00 Output Variables: Variable name Variable type Variable units PRES 5 Pa ZH 5 m ZF 5 m NO2 5 ppmV NO 5 ppmV O 5 ppmV O3 5 ppmV NO3 5 ppmV O1D 5 ppmV OH 5 ppmV HO2 5 ppmV H2O2 5 ppmV N2O5 5 ppmV HNO3 5 ppmV HONO 5 ppmV PNA 5 ppmV SO2 5 ppmV SULF 5 ppmV C2O3 5 ppmV MEO2 5 ppmV PAN 5 ppmV PACD 5 ppmV AACD 5 ppmV CXO3 5 ppmV ALD2 5 ppmV PANX 5 ppmV FORM 5 ppmV MEPX 5 ppmV MEOH 5 ppmV ROOH 5 ppmV XO2 5 ppmV XO2N 5 ppmV FACD 5 ppmV CO 5 ppmV HCO3 5 ppmV ALDX 5 ppmV MGLY 5 ppmV ETHA 5 ppmV ETOH 5 ppmV PAR 5 ppmV ROR 5 ppmV ETH 5 ppmV OLE 5 ppmV IOLE 5 ppmV ISOP 5 ppmV ISPD 5 ppmV OPO3 5 ppmV TERP 5 ppmV APIN 5 ppmV BENZENE 5 ppmV CRES 5 ppmV OPEN 5 ppmV BENZRO2 5 ppmV TOL 5 ppmV TO2 5 ppmV TOLRO2 5 ppmV XYLMN 5 ppmV XYLRO2 5 ppmV NAPH 5 ppmV PAHRO2 5 ppmV CRO 5 ppmV CAT1 5 ppmV CRON 5 ppmV OPAN 5 ppmV CL2 5 ppmV CL 5 ppmV HOCL 5 ppmV CLO 5 ppmV FMCL 5 ppmV HCL 5 ppmV CLNO2 5 ppmV SESQ 5 ppmV SOAALK 5 ppmV H2NO3PIJ 5 ppmV H2NO3PK 5 ppmV VLVPO1 5 ppmV VSVPO1 5 ppmV VSVPO2 5 ppmV VSVPO3 5 ppmV VIVPO1 5 ppmV VLVOO1 5 ppmV VLVOO2 5 ppmV VSVOO1 5 ppmV VSVOO2 5 ppmV VSVOO3 5 ppmV PCVOC 5 ppmV FORM_PRIMARY 5 ppmV ALD2_PRIMARY 5 ppmV BUTADIENE13 5 ppmV ACROLEIN 5 ppmV ACRO_PRIMARY 5 ppmV TOLU 5 ppmV HG 5 ppmV HGIIGAS 5 ppmV ASO4J 5 ug m-3 ASO4I 5 ug m-3 ANH4J 5 ug m-3 ANH4I 5 ug m-3 ANO3J 5 ug m-3 ANO3I 5 ug m-3 AISO1J 5 ug m-3 AISO2J 5 ug m-3 ASQTJ 5 ug m-3 AORGCJ 5 ug m-3 AECJ 5 ug m-3 AECI 5 ug m-3 AOTHRJ 5 ug m-3 AOTHRI 5 ug m-3 AFEJ 5 ug m-3 AALJ 5 ug m-3 ASIJ 5 ug m-3 ATIJ 5 ug m-3 ACAJ 5 ug m-3 AMGJ 5 ug m-3 AKJ 5 ug m-3 AMNJ 5 ug m-3 ACORS 5 ug m-3 ASOIL 5 ug m-3 NUMATKN 5 m-3 NUMACC 5 m-3 NUMCOR 5 m-3 SRFATKN 5 m2 m-3 SRFACC 5 m2 m-3 SRFCOR 5 m2 m-3 AH2OJ 5 ug m-3 AH2OI 5 ug m-3 AH3OPJ 5 ug m-3 AH3OPI 5 ug m-3 ANAJ 5 ug m-3 ANAI 5 ug m-3 ACLJ 5 ug m-3 ACLI 5 ug m-3 ASEACAT 5 ug m-3 ACLK 5 ug m-3 ASO4K 5 ug m-3 ANH4K 5 ug m-3 ANO3K 5 ug m-3 AH2OK 5 ug m-3 AH3OPK 5 ug m-3 AISO3J 5 ug m-3 AOLGAJ 5 ug m-3 AOLGBJ 5 ug m-3 APCSOJ 5 ug m-3 ALVPO1I 5 ug m-3 ASVPO1I 5 ug m-3 ASVPO2I 5 ug m-3 ALVPO1J 5 ug m-3 ASVPO1J 5 ug m-3 ASVPO2J 5 ug m-3 ASVPO3J 5 ug m-3 AIVPO1J 5 ug m-3 ALVOO1I 5 ug m-3 ALVOO2I 5 ug m-3 ASVOO1I 5 ug m-3 ASVOO2I 5 ug m-3 ALVOO1J 5 ug m-3 ALVOO2J 5 ug m-3 ASVOO1J 5 ug m-3 ASVOO2J 5 ug m-3 ASVOO3J 5 ug m-3 NH3 5 ppmV SV_ISO1 5 ppmV SV_ISO2 5 ppmV SV_SQT 5 ppmV LV_PCSOG 5 ppmV W_VEL 5 m s-1 RH 5 1 TA 5 K Value for IOAPI_CHECK_HEADERS not defined;returning default: FALSE "BNDY_CONC_1" opened as UNKNOWN(R-W) File name "/rds/homes/m/mazzeoa/RDS/WM-Air-Storage/CMAQ/BCON_OUT_NESTED/WMA27KMS/BCON_v531_WMA27KMS_regrid_2016" File type BNDARY3 Execution ID "BCON_v531.exe" Grid name "WMA27KMS" Dimensions: 96 rows, 99 cols, 29 lays, 168 vbles, 1 cells thick NetCDF ID: 196608 opened as VOLATILE READWRITE Starting date and time 2016016:000000 (0:00:00 Jan. 16, 2016) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 Value for IOAPI_LOG_WRITE: F returning FALSE Timestep written to BNDY_CONC_1 for date and time 2016016:000000 Timestep written to BNDY_CONC_1 for date and time 2016016:010000 Timestep written to BNDY_CONC_1 for date and time 2016016:020000 Timestep written to BNDY_CONC_1 for date and time 2016016:030000 Timestep written to BNDY_CONC_1 for date and time 2016016:040000 Timestep written to BNDY_CONC_1 for date and time 2016016:050000 Timestep written to BNDY_CONC_1 for date and time 2016016:060000 Timestep written to BNDY_CONC_1 for date and time 2016016:070000 Timestep written to BNDY_CONC_1 for date and time 2016016:080000 Timestep written to BNDY_CONC_1 for date and time 2016016:090000 Timestep written to BNDY_CONC_1 for date and time 2016016:100000 Timestep written to BNDY_CONC_1 for date and time 2016016:110000 Timestep written to BNDY_CONC_1 for date and time 2016016:120000 Timestep written to BNDY_CONC_1 for date and time 2016016:130000 Timestep written to BNDY_CONC_1 for date and time 2016016:140000 Timestep written to BNDY_CONC_1 for date and time 2016016:150000 Timestep written to BNDY_CONC_1 for date and time 2016016:160000 Timestep written to BNDY_CONC_1 for date and time 2016016:170000 Timestep written to BNDY_CONC_1 for date and time 2016016:180000 Timestep written to BNDY_CONC_1 for date and time 2016016:190000 Timestep written to BNDY_CONC_1 for date and time 2016016:200000 Timestep written to BNDY_CONC_1 for date and time 2016016:210000 Timestep written to BNDY_CONC_1 for date and time 2016016:220000 Timestep written to BNDY_CONC_1 for date and time 2016016:230000 Timestep written to BNDY_CONC_1 for date and time 2016017:000000 >>----> Program BCON completed successfully <----<< 9.546u 2.250s 0:13.66 86.3% 0+0k 0+0io 0pf+0w exit ( )