================================================================================ | | | The Community Multiscale Air Quality (CMAQ) Model | | Version 5.3.3 | | | | Built and Maintained by the | | Office of Research and Development | | United States Environmental Protection Agency | | | | https://www.epa.gov/cmaq | | | | Source Code: https://www.github.com/USEPA/cmaq/tree/main | | Documentation: https://www.github.com/USEPA/cmaq/tree/main/DOCS | | | | The CMAQ Model is tested and released with cooperation from | | the Community Modeling and Analysis System (CMAS) Center via | | contract support. CMAS is managed by the Institute for the | | Environment, University of North Carolina at Chapel Hill. | | CMAS URL: (https://www.cmascenter.org) | | | ================================================================================ This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3 I/O Applications Programming Interface, [I/O API] which is built on top of the netCDF I/O library (Copyright 1993, 1996 University Corporation for Atmospheric Research/Unidata Program) and the PVM parallel-programming library (from Oak Ridge National Laboratory). Copyright (C) 1992-2002 MCNC, (C) 1992-2018 Carlie J. Coats, Jr., (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and (C) 2014-2020 UNC Institute for the Environment. Released under the GNU LGPL License, version 2.1. See URL https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html for conditions of use. ioapi-3.2: $Id: init3.F90 185 2020-08-28 16:49:45Z coats $ Version with PARMS3.EXT/PARAMETER::MXVARS3=16384 netCDF version 4.1.3 of Apr 17 2013 10:23:00 $ EXECUTION_ID: CMAQ_CCTMv533_ISAM_caoyq_20211119_002302_128156696 Value for IOAPI_CHECK_HEADERS: N returning FALSE "MET_CRO_3D" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/METCRO3D_d03_2021-07-29.nc" File type GRDDED3 Execution ID "mcip" Grid name "d03_CROSS" Dimensions: 205 rows, 271 cols, 34 lays, 18 vbles NetCDF ID: 65536 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 MET data determined based on WRF ARW version 4.2 Closing file MET_CRO_3D ======================================== |>--- RETRIEVE HORIZONTAL GRID ---<| ======================================== File "GRIDDESC" opened for input on unit: 98 /home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/GRIDDESC ====================================== |>--- RETRIEVE VERTICAL GRID ---<| ====================================== "MET_CRO_3D" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/METCRO3D_d03_2021-07-29.nc" File type GRDDED3 Execution ID "mcip" Grid name "d03_CROSS" Dimensions: 205 rows, 271 cols, 34 lays, 18 vbles NetCDF ID: 65536 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 ========================================= |>--- RETRIEVE SPECIES NAMELIST ---<| ========================================= =========================================== |>--- INITIALIZE PROCESS ANALYSIS ---<| =========================================== PA_DATAGEN: Process Analysis is not activated ================================== |>--- CONFIGURE SCENARIO ---<| ================================== SA_IO_LIST Sucessfully Opened Start counting the list... Reading ISAM control file TAGCLASSES = OZONE for 9 tags Tagged species found, 54, equals expected, 54, for the CB6R3_AE7_AQ mechanism. ISAM_INIT: SPC_LIST: 1 ANO3J ISAM_INIT: SPC_LIST: 2 ANO3I ISAM_INIT: SPC_LIST: 3 HNO3 ISAM_INIT: SPC_LIST: 4 NO ISAM_INIT: SPC_LIST: 5 NO2 ISAM_INIT: SPC_LIST: 6 NO3 ISAM_INIT: SPC_LIST: 7 HONO ISAM_INIT: SPC_LIST: 8 N2O5 ISAM_INIT: SPC_LIST: 9 PAN ISAM_INIT: SPC_LIST: 10 NTR1 ISAM_INIT: SPC_LIST: 11 NTR2 ISAM_INIT: SPC_LIST: 12 INTR ISAM_INIT: SPC_LIST: 13 PNA ISAM_INIT: SPC_LIST: 14 PANX ISAM_INIT: SPC_LIST: 15 CLNO2 ISAM_INIT: SPC_LIST: 16 CLNO3 ISAM_INIT: SPC_LIST: 17 XO2 ISAM_INIT: SPC_LIST: 18 XO2H ISAM_INIT: SPC_LIST: 19 XO2N ISAM_INIT: SPC_LIST: 20 ROR ISAM_INIT: SPC_LIST: 21 MEO2 ISAM_INIT: SPC_LIST: 22 ISO2 ISAM_INIT: SPC_LIST: 23 C2O3 ISAM_INIT: SPC_LIST: 24 CXO3 ISAM_INIT: SPC_LIST: 25 CO ISAM_INIT: SPC_LIST: 26 ALD2 ISAM_INIT: SPC_LIST: 27 ALDX ISAM_INIT: SPC_LIST: 28 ETH ISAM_INIT: SPC_LIST: 29 ETHA ISAM_INIT: SPC_LIST: 30 ETOH ISAM_INIT: SPC_LIST: 31 FORM ISAM_INIT: SPC_LIST: 32 IOLE ISAM_INIT: SPC_LIST: 33 ISOP ISAM_INIT: SPC_LIST: 34 MEOH ISAM_INIT: SPC_LIST: 35 OLE ISAM_INIT: SPC_LIST: 36 ECH4 ISAM_INIT: SPC_LIST: 37 PAR ISAM_INIT: SPC_LIST: 38 TERP ISAM_INIT: SPC_LIST: 39 TOL ISAM_INIT: SPC_LIST: 40 XYLMN ISAM_INIT: SPC_LIST: 41 NAPH ISAM_INIT: SPC_LIST: 42 ETHY ISAM_INIT: SPC_LIST: 43 PRPA ISAM_INIT: SPC_LIST: 44 ACET ISAM_INIT: SPC_LIST: 45 KET ISAM_INIT: SPC_LIST: 46 GLY ISAM_INIT: SPC_LIST: 47 BENZENE ISAM_INIT: SPC_LIST: 48 APIN ISAM_INIT: SPC_LIST: 49 GLYD ISAM_INIT: SPC_LIST: 50 MEPX ISAM_INIT: SPC_LIST: 51 HO2 ISAM_INIT: SPC_LIST: 52 O3 ISAM_INIT: SPC_LIST: 53 O1D ISAM_INIT: SPC_LIST: 54 O ISAM_INIT: SPC_LIST: 1 ANO3J ISAM_INIT: SPC_LIST: 2 ANO3I ISAM_INIT: SPC_LIST: 3 HNO3 ISAM_INIT: SPC_LIST: 4 NO ISAM_INIT: SPC_LIST: 5 NO2 ISAM_INIT: SPC_LIST: 6 NO3 ISAM_INIT: SPC_LIST: 7 HONO ISAM_INIT: SPC_LIST: 8 N2O5 ISAM_INIT: SPC_LIST: 9 PAN ISAM_INIT: SPC_LIST: 10 NTR1 ISAM_INIT: SPC_LIST: 11 NTR2 ISAM_INIT: SPC_LIST: 12 INTR ISAM_INIT: SPC_LIST: 13 PNA ISAM_INIT: SPC_LIST: 14 PANX ISAM_INIT: SPC_LIST: 15 CLNO2 ISAM_INIT: SPC_LIST: 16 CLNO3 ISAM_INIT: SPC_LIST: 17 XO2 ISAM_INIT: SPC_LIST: 18 XO2H ISAM_INIT: SPC_LIST: 19 XO2N ISAM_INIT: SPC_LIST: 20 ROR ISAM_INIT: SPC_LIST: 21 MEO2 ISAM_INIT: SPC_LIST: 22 ISO2 ISAM_INIT: SPC_LIST: 23 C2O3 ISAM_INIT: SPC_LIST: 24 CXO3 ISAM_INIT: SPC_LIST: 25 CO ISAM_INIT: SPC_LIST: 26 ALD2 ISAM_INIT: SPC_LIST: 27 ALDX ISAM_INIT: SPC_LIST: 28 ETH ISAM_INIT: SPC_LIST: 29 ETHA ISAM_INIT: SPC_LIST: 30 ETOH ISAM_INIT: SPC_LIST: 31 FORM ISAM_INIT: SPC_LIST: 32 IOLE ISAM_INIT: SPC_LIST: 33 ISOP ISAM_INIT: SPC_LIST: 34 MEOH ISAM_INIT: SPC_LIST: 35 OLE ISAM_INIT: SPC_LIST: 36 ECH4 ISAM_INIT: SPC_LIST: 37 PAR ISAM_INIT: SPC_LIST: 38 TERP ISAM_INIT: SPC_LIST: 39 TOL ISAM_INIT: SPC_LIST: 40 XYLMN ISAM_INIT: SPC_LIST: 41 NAPH ISAM_INIT: SPC_LIST: 42 ETHY ISAM_INIT: SPC_LIST: 43 PRPA ISAM_INIT: SPC_LIST: 44 ACET ISAM_INIT: SPC_LIST: 45 KET ISAM_INIT: SPC_LIST: 46 GLY ISAM_INIT: SPC_LIST: 47 BENZENE ISAM_INIT: SPC_LIST: 48 APIN ISAM_INIT: SPC_LIST: 49 GLYD ISAM_INIT: SPC_LIST: 50 MEPX ISAM_INIT: SPC_LIST: 51 HO2 ISAM_INIT: SPC_LIST: 52 O3 ISAM_INIT: SPC_LIST: 53 O1D ISAM_INIT: SPC_LIST: 54 O # FINAL List of ISAM species = 54 1 ANO3J 2 ANO3I 3 HNO3 4 NO 5 NO2 6 NO3 7 HONO 8 N2O5 9 PAN 10 NTR1 11 NTR2 12 INTR 13 PNA 14 PANX 15 CLNO2 16 CLNO3 17 XO2 18 XO2H 19 XO2N 20 ROR 21 MEO2 22 ISO2 23 C2O3 24 CXO3 25 CO 26 ALD2 27 ALDX 28 ETH 29 ETHA 30 ETOH 31 FORM 32 IOLE 33 ISOP 34 MEOH 35 OLE 36 ECH4 37 PAR 38 TERP 39 TOL 40 XYLMN 41 NAPH 42 ETHY 43 PRPA 44 ACET 45 KET 46 GLY 47 BENZENE 48 APIN 49 GLYD 50 MEPX 51 HO2 52 O3 53 O1D 54 O ISAM WARNING: Tagged Species, XO2 not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, XO2H not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, XO2N not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, ROR not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, MEO2 not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, ISO2 not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, C2O3 not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, CXO3 not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, HO2 not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, O1D not transported. Modify species namelist(s) to include process. ISAM WARNING: Tagged Species, O not transported. Modify species namelist(s) to include process. >>--->> WARNING in subroutine GET_SPC_INDEX on PE 000 Above Problems Encountered INIT_MEDC_1 :/home/caoyq/CMAQ-5.3.3/CMAQ-5.3.3_ISAM/CCTM/scripts/output/2021-07-27/d03/CCTM_MEDIA_CONC_20210728.nc >>--->> WARNING in subroutine OPEN3 File not available. "GRID_CRO_2D" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/GRIDCRO2D_d03_2021-07-29.nc" File type GRDDED3 Execution ID "mcip" Grid name "d03_CROSS" Dimensions: 205 rows, 271 cols, 1 lays, 7 vbles NetCDF ID: 131072 opened as READONLY Time-independent data. "GRID_DOT_2D" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/GRIDDOT2D_d03_2021-07-29.nc" File type GRDDED3 Execution ID "mcip" Grid name "d03_DOT" Dimensions: 206 rows, 272 cols, 1 lays, 9 vbles NetCDF ID: 196608 opened as READONLY Time-independent data. "LUFRAC_CRO" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/LUFRAC_CRO_d03_2021-07-29.nc" File type GRDDED3 Execution ID "mcip" Grid name "d03_CROSS" Dimensions: 205 rows, 271 cols, 21 lays, 1 vbles NetCDF ID: 262144 opened as READONLY Time-independent data. "MET_CRO_2D" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/METCRO2D_d03_2021-07-29.nc" File type GRDDED3 Execution ID "mcip" Grid name "d03_CROSS" Dimensions: 205 rows, 271 cols, 1 lays, 35 vbles NetCDF ID: 327680 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 "MET_DOT_3D" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/METDOT3D_d03_2021-07-29.nc" File type GRDDED3 Execution ID "mcip" Grid name "d03_DOT" Dimensions: 206 rows, 272 cols, 34 lays, 6 vbles NetCDF ID: 393216 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 "GR_EMIS_001" opened as OLD:READ-ONLY File name "/public/share/smoke/research/119/cmaq/D3/emis.mrg.agriculture.d3.cmaq_cb05_soa.202121000.ncf" File type GRDDED3 Execution ID "????????????????" Grid name "LamCon_35N_103W" Dimensions: 205 rows, 271 cols, 1 lays, 32 vbles NetCDF ID: 458752 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 GR_EM_SYM_DATE_0 | F "GR_EMIS_002" opened as OLD:READ-ONLY File name "/public/share/smoke/research/119/cmaq/D3/emis.mrg.industry.d3.cmaq_cb05_soa.202121000.ncf" File type GRDDED3 Execution ID "????????????????" Grid name "LamCon_35N_103W" Dimensions: 205 rows, 271 cols, 14 lays, 32 vbles NetCDF ID: 524288 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 GR_EM_SYM_DATE_0 | F "GR_EMIS_003" opened as OLD:READ-ONLY File name "/public/share/smoke/research/119/cmaq/D3/emis.mrg.power.d3.cmaq_cb05_soa.202121000.ncf" File type GRDDED3 Execution ID "????????????????" Grid name "LamCon_35N_103W" Dimensions: 205 rows, 271 cols, 14 lays, 32 vbles NetCDF ID: 589824 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 GR_EM_SYM_DATE_0 | F "GR_EMIS_004" opened as OLD:READ-ONLY File name "/public/share/smoke/research/119/cmaq/D3/emis.mrg.residential.d3.cmaq_cb05_soa.202121000.ncf" File type GRDDED3 Execution ID "????????????????" Grid name "LamCon_35N_103W" Dimensions: 205 rows, 271 cols, 1 lays, 32 vbles NetCDF ID: 655360 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 GR_EM_SYM_DATE_0 | F "GR_EMIS_005" opened as OLD:READ-ONLY File name "/public/share/smoke/research/119/cmaq/D3/emis.mrg.transportation.d3.cmaq_cb05_soa.202121000.ncf" File type GRDDED3 Execution ID "????????????????" Grid name "LamCon_35N_103W" Dimensions: 205 rows, 271 cols, 1 lays, 32 vbles NetCDF ID: 720896 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 GR_EM_SYM_DATE_0 | F "GR_EMIS_006" opened as OLD:READ-ONLY File name "/public/share/smoke/research/119/cmaq/D3/emis.mrg.biogenic.d3.cmaq_cb05_soa.202121000.ncf" File type GRDDED3 Execution ID "????????????????" Grid name "METCRO_d3_CROSS" Dimensions: 205 rows, 271 cols, 1 lays, 20 vbles NetCDF ID: 786432 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 GR_EM_SYM_DATE_0 | F "INIT_CONC_1" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/CMAQ-5.3.3_ISAM/CCTM/scripts/output/2021-07-27/d03/CCTM_CGRID_20210728.nc" File type GRDDED3 Execution ID "CMAQ_CCTMv533_ISAM_caoyq_20211119_002302_128156696" Grid name "d03" Dimensions: 205 rows, 271 cols, 34 lays, 223 vbles NetCDF ID: 851968 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 1 "ISAM_PREVDAY" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/CMAQ-5.3.3_ISAM/CCTM/scripts/output/2021-07-27/d03/CCTM_SA_CGRID_20210728.nc" File type GRDDED3 Execution ID "CMAQ_CCTMv533_ISAM_caoyq_20211119_002302_128156696" Grid name "d03" Dimensions: 205 rows, 271 cols, 34 lays, 648 vbles NetCDF ID: 917504 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 0 Number of Emissions Layers: 14 out of total Number of Model Layers: 34 "MET_BDY_3D" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/mcip/scripts/data/2021-07-27/d03/METBDY3D_d03_2021-07-29.nc" File type BNDARY3 Execution ID "mcip" Grid name "d03_CROSS" Dimensions: 205 rows, 271 cols, 34 lays, 18 vbles, 1 cells thick NetCDF ID: 983040 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 "BNDY_CONC_1" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/bcon/scripts/data/2021-07-27/BCON_v533_d03_regrid_2021-07-29" File type BNDARY3 Execution ID "BCON_v533.exe" Grid name "d03" Dimensions: 205 rows, 271 cols, 34 lays, 220 vbles, 1 cells thick NetCDF ID: 1048576 opened as READONLY Starting date and time 2021210:000000 (0:00:00 July 29, 2021) Timestep 010000 (1:00:00 hh:mm:ss) Maximum current record number 25 Warning! Something went wrong while reading the GeneralSpecs section of the Emissions Control Namelist. Default values for this section will be assumed. Warning! Something went wrong while reading the ChemicalFamilies section of the Emissions Control Namelist. Default values for this section will be assumed. Warning! Something went wrong while reading the StreamFamilies section of the Emissions Control Namelist. Default values for this section will be assumed. Warning! Something went wrong while reading the RegionFamilies section of the Emissions Control Namelist. Default values for this section will be assumed. "ISAM_REGIONS" opened as OLD:READ-ONLY File name "/home/caoyq/CMAQ-5.3.3/CMAQ-5.3.3_ISAM/ISAM_region/ISAM_d03-3km.nc" File type GRDDED3 Execution ID "ÖÖÿ†ù ÿ µëÖ¼‹ù ÿ µëÖØ" Grid name "" Dimensions: 205 rows, 271 cols, 1 lays, 9 vbles NetCDF ID: 1114112 opened as READONLY Time-independent data. Closing file ISAM_REGIONS CTM_OCEAN_CHEM set to FALSE. Open ocean and surf zone fractions will be set to 0. There will be no oceanic halogen-mediated loss of ozone or sea spray aerosol emissions. netCDF error number -40 >>--->> WARNING in subroutine RDTFLAG Error reading netCDF time step flag for ISAM_PREVDAY M3WARN: DTBUF 0:00:00 July 29, 2021 (2021210:000000) >>--->> WARNING in subroutine XTRACT3 Time step not available for file: ISAM_PREVDAY M3WARN: DTBUF 0:00:00 July 29, 2021 (2021210:000000) *** ERROR ABORT in subroutine retrieve_time_de on PE 000 Could not extract ISAM_PREVDAY file PM3EXIT: DTBUF 0:00:00 July 29, 2021 Date and time 0:00:00 July 29, 2021 (2021210:000000)