Hi AMET developers and users,
Below is the issue I am trying to solve with AMETv1.4.
Segmentation Fault with AMET v1.4 aqProject_post_only.csh, happening with CSN data ONLY while database of other networks were populated successfully. This Error message happened with both intel and pgi compiler.
Below if the Error I copied from the log file.
You comments are highly appreciated.
…
Value for IN_TABLE: ‘/uufs/chpc.utah.edu/common/home/u6002243/AMET_v1.4_pgi/AMET/obs/AQ/2011/CSN_data_2011_VIEWS.csv’
Value for IN_TABLE: ‘/uufs/chpc.utah.edu/common/home/u6002243/AMET_v1.4_pgi/AMET/obs/AQ/2011/CSN_data_2011_VIEWS.csv’
Value for SITE_FILE: ‘/uufs/chpc.utah.edu/common/home/u6002243/AMET_v1.4_pgi/AMET/obs/AQ/site_metadata_files/AQS_full_site_list.csv’
Value for SITE_FILE: ‘/uufs/chpc.utah.edu/common/home/u6002243/AMET_v1.4_pgi/AMET/obs/AQ/site_metadata_files/AQS_full_site_list.csv’
Value for OUT_TABLE: ‘/uufs/chpc.utah.edu/common/home/u6002243/AMET_v1.4_pgi/AMET/output/aqARMS17_Feb/sitex_output/CSN_aqARMS17_Feb.csv’
Value for OUT_TABLE: ‘/uufs/chpc.utah.edu/common/home/u6002243/AMET_v1.4_pgi/AMET/output/aqARMS17_Feb/sitex_output/CSN_aqARMS17_Feb.csv’
Value for START_DATE: 2011032
Value for START_TIME: 0
Value for END_DATE: 2011059
Value for END_TIME: 230000
Value for TIME_SHIFT: 0
Value for APPLY_DLS: N returning FALSE
Value for PRECIP: ‘RT’
Value for PRECIP: ‘RT’
Value for MISSING: ‘-999’
Value for MISSING: ‘-999’
Segmentation fault
Finished running site compare for network CSN
Loading required package: RMySQL
Loading required package: DBI
Project_ID: aqARMS17_Feb
Network: CSN
Sitex File: /uufs/chpc.utah.edu/common/home/u6002243/AMET_v1.4_pgi/AMET/output/aqARMS17_Feb/sitex_output/CSN_aqARMS17_Feb.csv
MySQL Server: mysql.chpc.utah.edu
Error in file(file, “rt”) : cannot open the connection
Calls: read.csv -> read.table -> file
In addition: Warning message:
In file(file, “rt”) :
cannot open file ‘/uufs/chpc.utah.edu/common/home/u6002243/AMET_v1.4_pgi/AMET/output/aqARMS17_Feb/sitex_output/CSN_aqARMS17_Feb.csv’: No such file or directory
Execution halted
Finshed populating database for network CSN