Difference in variables produced by SMKINVEN and Error in SMKMERGE

I am running Inventory import program SMKINVEN to import the area source inventory for PM10 in ORL format. I am using the same script settings used in nctox case. When I look at the two SMKINVEN log files produced for nctox and my case, I found that there is difference in variables written to PM10.ncf file.
In nctox case it is writing 7 variables:
“IOAPI_DAT” opened as NEW(READ-WRITE )
File name “/data/SMOKE/SMOKE_V4.7/data/inventory/nctox/area.nctox_dat/PM10.ncf”
File type GRDDED3
Execution ID “???”
Grid name “”
Dimensions: 3411 rows, 1 cols, 1 lays, 7 vbles
NetCDF ID: 131072 opened as READWRITE
Time-independent data.
SRCID written to IOAPI_DAT
PM10 written to IOAPI_DAT
DY_PM10 written to IOAPI_DAT
EF_PM10 written to IOAPI_DAT
CE_PM10 written to IOAPI_DAT
RE_PM10 written to IOAPI_DAT
RP_PM10 written to IOAPI_DAT
Closing file IOAPI_DAT

Whereas for my case it is writing only two variables to PM10.ncf file:
“IOAPI_DAT” opened as NEW(READ-WRITE )
File name “/data/SMOKE/SMOKE_V4.7/data/inventory/PMC/area.PMC_dat/PM10.ncf”
File type GRDDED3
Execution ID “???”
Grid name “”
Dimensions: 96 rows, 1 cols, 1 lays, 2 vbles
NetCDF ID: 131072 opened as READWRITE
Time-independent data.
SRCID written to IOAPI_DAT
PM10 written to IOAPI_DAT
Closing file IOAPI_DAT

Why other variables are not written in my case? I have provided values for CE, RE, RP in my area source inventory input file. From where does nctox case producing DY_PM10 and EF_PM10 variables?

At this moment the SMKINVEN is showing normal completion in both cases, but when I further processed for GRDMAT and SMKMERGE for area source only, then it generates an error in SMKMERGE program in my case only.

The Error Says
*** ERROR ABORT in subroutine OPENMRGIN
Number of map-formatted variables is inconsistent with header of inventory file.
I/O API header has -1 variables indicated, but map-formated inventory file has 1

(Refer Attached log of SMKMERGE for the details).

smkinven.area.nctox.log.txt (27.5 KB) smkinven.area.PMC.log.txt (9.6 KB)
smkmerge.area.PMC.20110110.PNE_LL_2K.log.txt (6.0 KB)

Can you remove the columns (10, 11, 12) for control efficiency (CE), rule effectiveness (RE) and rule penetration (RP) in your ORL PM10 inventory file and then rerun Smkinven? These columns are not currently fully supported in SMOKE so you can remove them without any problem. As a default, Smkinven will assign the default values (CE=0, RE=1, RP=1). Let me know how it goes.

Thank you for your help. I will try this and update the status.