I was following the git instructions. I changed the make all to make. I had similar issues with compiling the required softwares using the compile scripts given here. Home · CEMPD/SMOKE Wiki · GitHub.
I managed to compile them without the compile script by just using configure and make/install without the compile scripts given.
with make all get the same error.
about the make dir, I do have the make dir and the folder is already created.
i am not really sure whats going on. Any thought? your help is much appreciated.
The issue you are having is due to the compiler could not find precompiled intermediate modules in earlier step. For some reason, those intermediate modules were compiled and put into $SMK_HOME/src instead of $SMK_HOME/$BIN.
Please check if you have variable $BIN setup properly in SMOKE_INSTALL.config file and that you have directory $SMK_HOME/$BIN created when you run the compile.SMOKE.csh script.
If you still have issue, please share your SMOKE_INSTALL.config.cshcompile.SMOKE.csh and src/Makeinclude files.
Thank you so much for your help! The compile.smoke script did create the $SMK_HOME/$BIN, but I couldn’t get it to work on the Niagara cluster, where I had previous versions of Smoke installed. I decided to start fresh on the Cedar cluster, and I was able to compile v5 it there without any issues. If I return to the Niagara system and run into the same errors, I’ll be sure to reach out again. Thanks once more!