Error while compiling CMAQ-5.3.2 on Cheyenne at NCAR

lwu127 · September 6, 2021, 1:38pm

Hi everyone,
I am now compiling CMAQ-5.3.2 on Cheyenne at NCAR. The loaded modules are:

ncarenv/1.3 3) ncarcompilers/0.5.0 5) ncl/6.6.2 7) ncview/2.1.7
intel/19.0.5 4) mpt/2.22 6) nco/4.9.5 8) git/2.22.0
I installed ioapi-3.2, mpich-3.3.2, netcdf-c-4.7.0 and netcdf-f-4.4.5 on my own account. When i compile CMAQ using “./bldit_cctm.csh intel” the following error popped up:

2021-09-06 (2)3332×463 214 KB

This error shows that the /glade/u/home/CMAQ/CMAQ_REPO or the /glade/u/home/hmao/CMAQ/CMAQ-5.3.2/data/x86_64/intel directory not found. However, i checked and these directory exists. In the .bashrc file, i also set
export CMAQ_HOME=/glade/u/home/hmao/CMAQ/CMAQ-5.3.2
export CMAQ_REPO=/glade/u/home/hmao/CMAQ/CMAQ_REPO
export CMAQ_LIB=/glade/u/home/hmao/CMAQ/CMAQ-5.3.2/lib
export CMAQ_DATA=/glade/u/home/hmao/CMAQ/CMAQ-5.3.2/data
I also attached the bldit_cctm.csh and config_cmaq.csh here.
Could someone help with this?
Thanks!
Lin
config_cmaq.csh.txt (11.3 KB)
bldit_cctm.csh.txt (30.6 KB)

lizadams · September 7, 2021, 7:31pm

Have you tried following the tutorials for compiling CMAQ-5.3.2?

USEPA/CMAQ/blob/main/DOCS/Users_Guide/Tutorials/CMAQ_UG_tutorial_build_library_intel.md

## Install netCDF-C

1. Download netCDF-C from the following website https://www.unidata.ucar.edu/downloads/netcdf/index.jsp

```
wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-c-4.7.0.tar.gz
```

2. Untar the file 

```
tar -xzvf netcdf-c-4.7.0.tar.gz
```

3. Change directories into the package
```
cd netcdf-c-4.7.0
```

3. Verify that no modules are currently loaded using module commands.

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and

github.com

USEPA/CMAQ/blob/main/DOCS/Users_Guide/Tutorials/CMAQ_UG_tutorial_benchmark.md

# CMAQ Installation & Benchmarking Tutorial

Purpose: This guide describes how to install and run the CMAQ test case, which serves two different purposes. The first being to familiarize the user with the CMAQ suite of programs and how they work together, and secondly to verify the installation of the software on your system via benchmarking. 

Benchmarking refers to a simulation that is used to verify that the software is installed correctly.  Benchmarking CMAQ is recommended in the following circumstances:
- Installation by a new user
- Installation on a new server     
- Following kernel upgrades
- Following Fortran/C compiler upgrades
- Following netCDF or I/O API library upgrades

## System Checks 

The following support software are required for compiling and running CMAQ.  

1. Fortran and C compilers, e.g., [Intel](https://software.intel.com/en-us/fortran-compilers), [Portland Group](http://www.pgroup.com), [Gnu](https://gcc.gnu.org/wiki/GFortran)
2. [Git](https://git-scm.com/book/en/v2/Getting-Started-Installing-Git)
2. Message Passing Interface (MPI), e.g., [OpenMPI](https://www.open-mpi.org) or [MVAPICH2](http://www.mcs.anl.gov/research/projects/mpich2).
3. Latest release of [netCDF-C](https://www.unidata.ucar.edu/software/netcdf/docs/getting_and_building_netcdf.html) and [netCDF-Fortran](https://www.unidata.ucar.edu/software/netcdf/docs/building_netcdf_fortran.html) **built without netCDF4, HDF5, HDF4, DAP client, PnetCDF, or zlib support** 
4. [I/O API](https://www.cmascenter.org/download/software/ioapi/ioapi_3-2.cfm?DB=TRUE) version 3.2 **tagged 20200828**

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Liz

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Error while compiling CMAQ-5.3.2 on Cheyenne at NCAR

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