Segmentation fault when running nonpt

SMOKE
1

Hi all,
I got a Segmentation fault when running nonpt for NEI 2017. It seems there are too many warnings that crashed the log analyzer. Is there any way to solve this problem? The error message is below and logs are attached.
Thanks so much, and any suggestions are appreciated.

  • ERROR detected in logfile:
  • /gpfs/group/NEI/2017/2017emissions/INSTALL_DIR/2017gb_17j/intermed/nonpt/logs/smkinven_nonpt_jan_2017gb_17j.log

ERROR: detected in Smkinven
ERROR: Running smk_run for part 1 in jan_2017
inlog = /gpfs/group/NEI/2017/2017emissions/INSTALL_DIR/2017gb_17j/intermed/nonpt/logs/smkinven_nonpt_jan_2017gb_17j.log
Removing the many ‘Monthly inventory is missing’ warnings from the Smkinven log for mixed annual/monthly sectors.
This warning appears millions of times and basically crashes the log analyzer.
log analyzer
Getting message data (might take some time)…
Finished getting data
Classifying message types…
Total number of known messages: 37
Total number of unknown messages: 0
Level 3 analysis…
Finished classifying message types
log analyzer
Getting message data (might take some time)…
Finished getting data
Classifying message types…
Total number of known messages: 37
Total number of unknown messages: 0
Level 1 analysis…
Finished classifying message types
Testing for exit priority <= 1
All message priorities > 1
Job Ended at Wed Mar 2 12:59:09 EST 2022
rep_logs_nonpt_2017gb_17j_CONUS36k_172x148_all_level3.csv (9.1 KB)
rep_logs_nonpt_2017gb_17j_CONUS36k_172x148_all_level1.csv (1.9 KB)
smkinven_nonpt_jan_2017gb_17j.log.txt (11.4 KB)

2

Were you using the inventories as provided or did you change them? What script were you running to cause this issue?

1 Like
3

Hi Alison,
I used the inventories as provided but with a 36US3 grid. The running script is attached.
Monthly_nonpt_36US3_2017gb_17j.csh (6.5 KB)

4

So you did not make any other changes to the original files/scripts? Did you get the segmentation fault when Smkinven failed? Any error message from your computer terminal screen?

1 Like
5

Hi Beak,
I changed “RUN_MONTHS”, “EPI_ENDATE_TIME”, “ATPRO_HOURLY_NCF”, “SRGDESC”, and “SRGPRO”.
I didn’t get this question “Did you get the segmentation fault when Smkinven failed?”.
The error message from the screen is attached.
Thanks so much for your reply.
nonpt2.pbs.o35027743.txt (5.4 KB)
nonpt2.pbs.e35027743.txt (1.1 KB)

6

Hi @eyth.alison @bbaek
Thanks so much for your reply. It turns out that the SMOKE compiled with ifort can get the nonpt running down. I guess ifort is better for my cluster.