Hi all,
I built and ran CMAQv5.2 without any error. Here is the rum cctm log filehttps://raw.githubusercontent.com/JiaoyanHuang/Testing-codes/master/run.cctm_1day_v2.log
I downloaded reference data fromhttps://drive.google.com/drive/folders/0B2kjxCwKICxUZWp2ZVFGZkx6YzA
after
tar xzvf CMAQv5.2_Benchmark_SingleDay_Output_09_05_2017.tar.gz
I do see two ACONC files in the dir
-rw-r--r-- 1 jhuang hpc 174445528 Aug 31 2017 CCTM_ACONC_v52_cb6r3_intel17.0_SE52BENCH_20110701.nc
-rw-r--r-- 1 jhuang hpc 174445528 Jun 28 2017 CCTM_ACONC_v52_intel_SE52BENCH_20110701.nc
Here are all my reference files
CMAQv5.2_Benchmark_MultiDay_Input_09_05_2017.tar.gz
https://drive.google.com/open?id=1iBV-hGvIxGEQzdW8E1tXIwaaRUNeW7_K
CMAQv5.2_Benchmark_MultiDay_Output_09_05_2017.tar.gz
https://drive.google.com/open?id=0B3Xmjif6GtQZLUk2NFlfcENXZGs
CMAQv5.2_Benchmark_SingleDay_Input_09_12_2017.tar.gz
https://drive.google.com/open?id=1C7ZnaK8yNRu9yQotHTvRdhLIdfaCoaEv
CMAQv5.2_Benchmark_SingleDay_Output_09_05_2017.tar.gz
https://drive.google.com/open?id=1VA6ofMAuk3zoHwwr7slgYvoAK4kk7typ
My simulations have <0.5% difference for O3 compared with
CCTM_ACONC_v52_intel_SE52BENCH_20110701.nc
but show large difference for O3 compared with
CCTM_ACONC_v52_cb6r3_intel17.0_SE52BENCH_20110701.nc
Also large difference compared with reference data when I ran multiday simulations
I am a little confused here, what data I should use for benchmark run?
Thank you.
Joey
peng
November 18, 2019, 6:18am
3
can I see your config_cmaq.csh and bldit.cctm?
Hi Peng,
Here are my config and bldit,
#! /bin/csh -f
# ================= CMAQ5.0.2 Configuration Script ================== #
# Requirements: I/O API & netCDF libs, PGI, Intel, Gnu Compiler #
# Collection (GCC), MPICH for multiprocessor computing #
# Note that this script is configured/tested for Red Hat Linux O/S #
# #
# To report problems or request help with this script/program: #
# http://www.cmascenter.org/help_desk.cfm #
# =================================================================== #
#> config.cmaq
#> sourced from bldit.<model>
#> model repository location
setenv M3HOME /storage/highspeed/Models/aq/CMAQ/CMAQv5.0.2
setenv M3MODEL ${M3HOME}/models
setenv M3DATA ${M3HOME}/data
#===============================================================================
show original
#!/bin/csh -f
# ====================== CCTMv5.0.2 Build Script ======================= #
# Usage: bldit.cctm >&! bldit.cctm.log #
# Requirements: I/O API & netCDF libs, a Fortran compiler, #
# and MPI for multiprocessor computing #
# Note that this script is configured/tested for Red Hat Linux O/S #
# The following environment variables must be set for this script to #
# build an executable. #
# setenv M3MODEL <source code repository> #
# setenv M3LIB <code libraries> #
# To report problems or request help with this script/program: #
# http://www.cmascenter.org/html/help.html #
# ====================================================================== #
#> Source the config.cmaq file to set the build environment
source ../config.cmaq
#> Check for M3HOME and M3LIB settings:
if ( ! -e $M3HOME || ! -e $M3LIB ) then
show original
esm
December 1, 2019, 8:27pm
6
Hi
I want to calculate benchmarking difference. How did you calculate the difference between your simulations and benchmark files? could you guide me, please?
Ensiyeh
Ensiyeh,
The easiest way is using VERDI, you can add two files and add the species you would like to compare into formula, and make a quick plot.
You can also use m3stat or m3diff (from m3tools) to see the overall differences between two files.
If you would like to investigate the detail differences in each grid at each time step, you can use ncl/R/python, read the files, and subtract data in one file from another file.
Joey
1 Like
cjcoats
December 2, 2019, 12:50pm
8
huangj1311:
If you would like to investigate the detail differences in each grid at each time step, you can use ncl/R/python, read the files, and subtract data in one file from another file.
M3Tools program m3diff does that also…
1 Like
esm
July 21, 2020, 1:53am
10
Hi